Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00639 ATGGAGTCCTTAAAGGCGCAAGAAGGAGGAGAGGAGCAAGTGAAGTGCGTGTGGGTTCATGGCCCTATCATCGTAGGAGCAGGACCCTCAGGGCTAGCCGTCGCCGCGTGCCTCTCCCACCACGGAGTACCCTACGTCATTCTCGAGAGAACAAACTGCATAACCTCACTTTGGCAACACAGAACCTACGACCGCCTCAAACTCCACCTCCCTAAACACTTCTGCGAACTCCCCTTAATACCCTTTCCCCTCCATTTCCCAAAATACCCCTCCAACTCCTACGCTTCACGCTTCAACATCCGCCCCAGGTTCAACCAGTCCGTTCAGACCGCCCAGTTCGACCCTTGTTCTCAGCTTTGGGTCGTCAAAACCAATGGTTTTCAGTACATTTCGCCGTGGCTTGTGGTTGCTACTGGAGAGAATGCTGAACCCGTTGTTCCCTCGATTTCTGGCATGGACAAGTTTCGCGGACCCATTGTTCACACCAGCGTCTATAAATCTGGTTCTGATTACAAGAACCAGAGGGTTTTGGTCATTGGTTGCGGCAACTCGGGTATGGAAGTTAGCTTGGATCTTTGCAGGCACAACGCCAACCCTTACATGGTTGCAAGAAACACAGTACATGTTTTGCCTATGGAGATGTTTGGGTTTTCGACGTTTGGAATAGCTATGGCTCTCTTGAAATGGCTTCCAATAAAGTTAGTAGACAAGTTGGTTTTGGCGGCGGCTAGGTTAATGTTGGGTGACACCGCTCGCTATGGCGTTAGAAGGCCCAAAACAGGGCCTATCGAGCTCAAACTAGTTACCGGGAAAACCCCTGTGCTTGATGTTGGACAAGTCGCTCAAATAAGATCCGGTAACATCAAGGTGATGGAAGGAGTGAAGGAGATAACAAGAAACGGTGCCAAGTTTATGGATGGACAAGAAAAGGAGTTCAGCGCTATAATATTGGCGACGGGATACAAAAGCAACGTGCCCACTTGGCTTAAGAGTTGTGAATCTTTCACGAAAGACGGAATGCCTAAAACGCCGTTTCCAATGGGTTGGAAGGGAGAGAACGGATTGTATACAGTGGGGTTCACGAGAAGAGGTCTTCTTGGAACTGCATCGGATGCCGTAAAAATTGCTAAAGACATCGCTGATCAATGGATGACCGTTAAGGACAGATCATACTGTAATTCCCACATCATCTTTCTCAAGAGTACATAG 1209 0.488 MESLKAQEGGEEQVKCVWVHGPIIVGAGPSGLAVAACLSHHGVPYVILERTNCITSLWQHRTYDRLKLHLPKHFCELPLIPFPLHFPKYPSNSYASRFNIRPRFNQSVQTAQFDPCSQLWVVKTNGFQYISPWLVVATGENAEPVVPSISGMDKFRGPIVHTSVYKSGSDYKNQRVLVIGCGNSGMEVSLDLCRHNANPYMVARNTVHVLPMEMFGFSTFGIAMALLKWLPIKLVDKLVLAAARLMLGDTARYGVRRPKTGPIELKLVTGKTPVLDVGQVAQIRSGNIKVMEGVKEITRNGAKFMDGQEKEFSAIILATGYKSNVPTWLKSCESFTKDGMPKTPFPMGWKGENGLYTVGFTRRGLLGTASDAVKIAKDIADQWMTVKDRSYCNSHIIFLKST 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00639 402 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA1-RELATED 13 395 - -
Gma06g00639 402 Gene3D - 22 389 IPR036188 -
Gma06g00639 402 SUPERFAMILY FAD/NAD(P)-binding domain 23 381 IPR036188 -
Gma06g00639 402 PRINTS FAD-dependent pyridine nucleotide reductase signature 22 41 - -
Gma06g00639 402 PRINTS FAD-dependent pyridine nucleotide reductase signature 175 193 - -
Gma06g00639 402 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 13 395 - -
Gma06g00639 402 Pfam FAD binding domain 23 52 IPR002938 GO:0071949
Gma06g00639 402 Pfam Flavin-binding monooxygenase-like 134 331 IPR020946 GO:0004499|GO:0050660|GO:0050661
Gma06g00639 402 PRINTS Pyridine nucleotide disulphide reductase class-II signature 21 43 - -
Gma06g00639 402 PRINTS Pyridine nucleotide disulphide reductase class-II signature 132 140 - -
Gma06g00639 402 PRINTS Pyridine nucleotide disulphide reductase class-II signature 171 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00639 Gma-Chr6 5767741 5770468 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00639 K11816 - gmx:100793803 828.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00646 04 5950767 5953467 Gma06g00639 06 5767741 5770468 GST
Gma17g01950 17 34718372 34720909 Gma06g00639 06 5767741 5770468 PCT
Gma14g01136 14 17321654 17324267 Gma06g00639 06 5767741 5770468 PCT
Gma06g00639 06 5767741 5770468 Gma17g01950 17 34718372 34720909 PCT
Gma06g00639 06 5767741 5770468 Gma14g01136 14 17321654 17324267 PCT