Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00646 ATGGAGTCCTTAAAGGGTGAAGAAGTAAAGTGCGTGTGGGTTCAGGGCCCTATCATCGTAGGAGCAGGACCCTCAGGGCTAGCCGTGGCCGCGTGCCTCTCCCACCATGGAGTGCCCTACGTCATTCTCGAGAGGAGCCACTGCATCACCTCCCTCTGGCAACACAGAACCTACGACCGTCTCAAACTCCACCTCCCCAAACACTTCTGCGAACTCCCCCTGATGCCCTTCCCCCTCCATTTCCCAAAATACCCCTCCAAGAACCAGTTCATCTCCTACCTCAACTCCTACGCTTCTCGCTTCAACATCCGCCCCAGGTTCAACCAATCCGTTCAGACCGCCGAGTTCGACCCTTCTTCTCAGCTTTGGCTCGTCAGAACCAACGGTTTTCAGTACATTTCCCCGTGGCTCGTCGTTGCTACCGGAGAGAATGCTGAGCCTGTTGTTCCCTCCATTTCTGGCATGGACATGTTTCACGGTCCCATTGTTCACACCAGCGTCTACAAATCTGGTTCTGATTACAATAACCAGAGGGTCTTGGTCATTGGCTGCGGCAACTCCGGTATGGAAGTTAGCTTGGATCTTTGCCGCCACAACGCCAACCCTTACATGGTTGCAAGAAACACAGTACATGTTTTGCCTAGAGAGATGTTTGGGTTTTCGACGTTTGGAATAGCTATGGCTCTCTTGAAATGGCTTCCAATAAAGGTAGTAGACAAGTTGGTTTTGGCGGCGGCTAGGTTAATGTTGGGTGACACCGCTCGTTATGGCGTTAGGAGGCCCAAAACGGGGCCTATAGAGCTCAAACTAGTAACCGGGAAAACCCCTGTGCTTGATGTTGGACAAGTGGCTCAAATAAGATCCGGTAACATAAAGGTGATGGAAGGTGTGAAGGAGATAACAAGAAATGGTGCCAAGTTTATGGATGGACAAGAAAAGGAGTTCAGCGCTATAATATTGGCAACGGGATACAAAAGCAACGTGCCCACTTGGCTTAAGAGCTGTGAATCTTTCACCAAAGACGGAATGCCGAAAACTCCGTTTCCAATGGGTTGGAAGGGAGAGAACGGATTATATACAGTGGGGTTCACGAGAAGAGGTCTTCTTGGAACTGCATCAGATGCCGTAAAAATTGCTAAAGACATCGCTGATCAATGGATGACCGTTAAGGACAAATCATACCGTAATTCCCACATCATCTTGCTCAAGAGTACATAG 1218 0.4959 MESLKGEEVKCVWVQGPIIVGAGPSGLAVAACLSHHGVPYVILERSHCITSLWQHRTYDRLKLHLPKHFCELPLMPFPLHFPKYPSKNQFISYLNSYASRFNIRPRFNQSVQTAEFDPSSQLWLVRTNGFQYISPWLVVATGENAEPVVPSISGMDMFHGPIVHTSVYKSGSDYNNQRVLVIGCGNSGMEVSLDLCRHNANPYMVARNTVHVLPREMFGFSTFGIAMALLKWLPIKVVDKLVLAAARLMLGDTARYGVRRPKTGPIELKLVTGKTPVLDVGQVAQIRSGNIKVMEGVKEITRNGAKFMDGQEKEFSAIILATGYKSNVPTWLKSCESFTKDGMPKTPFPMGWKGENGLYTVGFTRRGLLGTASDAVKIAKDIADQWMTVKDKSYRNSHIILLKST 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00646 405 SUPERFAMILY FAD/NAD(P)-binding domain 175 381 IPR036188 -
Gma04g00646 405 SUPERFAMILY FAD/NAD(P)-binding domain 18 284 IPR036188 -
Gma04g00646 405 PRINTS FAD-dependent pyridine nucleotide reductase signature 17 36 - -
Gma04g00646 405 PRINTS FAD-dependent pyridine nucleotide reductase signature 178 196 - -
Gma04g00646 405 PRINTS Pyridine nucleotide disulphide reductase class-II signature 16 38 - -
Gma04g00646 405 PRINTS Pyridine nucleotide disulphide reductase class-II signature 135 143 - -
Gma04g00646 405 PRINTS Pyridine nucleotide disulphide reductase class-II signature 174 198 - -
Gma04g00646 405 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 8 393 - -
Gma04g00646 405 Gene3D - 17 392 IPR036188 -
Gma04g00646 405 Pfam Pyridine nucleotide-disulphide oxidoreductase 18 209 - -
Gma04g00646 405 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Gma04g00646 405 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA1-RELATED 8 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00646 Gma-Chr4 5950767 5953467 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00646 K11816 - gmx:100789347 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00646 04 5950767 5953467 Gma06g00639 06 5767741 5770468 GST
Gma17g01950 17 34718372 34720909 Gma04g00646 04 5950767 5953467 PCT
Gma14g01136 14 17321654 17324267 Gma04g00646 04 5950767 5953467 PCT
Gma04g00646 04 5950767 5953467 Gma17g01950 17 34718372 34720909 PCT
Gma04g00646 04 5950767 5953467 Gma14g01136 14 17321654 17324267 PCT