Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01941 ATGCTCAAGCAAATCCTCAGCAAGCTTCCTCGGAAGTCGTTGAAGCCCGACTCGGACGAGTCACCCCGAGTCGACTCGGCTCGTTCCGCCGATTCGCCACGTGCTGCCGGCAGAAGCAACAAGCCACATGGCGGAAGTTCTTCCGCCGCCAAGCGAGCTTCTTCGTCGGCGGTGTTTCCGGCGAGCATGGTGTCCGGAATTGAACCTTTGGTGCCGTTTAAGGATGTTCCTAATGCTGAGAAGATGAACCTGTTTGTGAGCAAATTGAGCCTTTGTTGTGTCACATTTGATTTCACTGACCCTAGTAAAAGCAGTGCAGATAAAGATGTGAAAAGGAAGACTTTGGTTGAGCTTGTTGATTTTGTGGCTTGTGGGACAATGAGGTTTAGTGAGCCTGCTATTCTTGCTATCTGTAGAATGTGTGCTATTAATTTGTTTAGAGTTTTCCCTCCTAATTATAGGGCAAGTGGTGGTGGTGAGAATGATGATGATGAGCCTCTGTTTGATCCTGCTTGGCCACATTTGCAGCTTGTGTATGAATTGCTGCTTAAGTTTATCTCTTCCTCATGCATCGATGCGAAGGTGGCGAAAAAATATATTGATCACTCCTTTATTGCCAGATTGCTTGAATTGTTTGATTCGGAGGATCCTAGGGAAAGGGATTGCTTAAAGACTATTCTGCATAGGATTTATGGAAAGTTCATGGTGCATAGACCGTATATACGGAAATCTATTAACAATATATTTTATCGGTTCGTGTTTGAGACTGATAAGCCCAATGGGATTGGTGAGCTGTTGGAGATTTTTGGGAGCGTGATTACTGGGTTTGCTTTGCCCTTGAAAGAGGAACACAAAATCTTCTTGTGGAGGGTTTTGGTCCCCTTGCACAAGCCGAAATCTATTGGGGCCTACTTTCAGCAATTGTCCTACTGTGTTATGCAGTTTATAGAGAAGGAGCCAAAGTTAGCGAGCATTGTGATAAGGGGATTGTTGAAATATTGGCCAGCAACAAATAGCCAGAAAGAGGTGATGTTTCTGGGTGAACTGGAAGAAATTTTGGAAGTAATTAACATGGTAGAGTTCCAGAGGATCATGGTCCCTTTGTTTAGGCGGATCGGGTGCTGCATTAACAGTTTACACTTTCAGGTAGCTGAAAGGGCTCTTTTCTTATGGAACAATGACCACATTGTAAACTTGATTGCGCATAACCGACAAGTGATCCTGCCCATCATATTTTCAGCTTTAGACAGGAATGTTCAAAGCCATTGGAACCCGGCAGTCGTCAACCTAACTAACAATATTAGAAAGATGTTCTTGGAGATGGATGAGAAGTTCTTCATTTCTTGTCATAATCACTTTAAGGAGGAAGAAGCAATCTTGATCTCAACAGGGGAGAAGCGAAAGGAGGCATGGAAACAACTAGAGCATGCAGCCAGTCTAAGGCCAGTAACTGGAAACACTGCAGTTTTAGTGTCCTGA 1479 0.4422 MLKQILSKLPRKSLKPDSDESPRVDSARSADSPRAAGRSNKPHGGSSSAAKRASSSAVFPASMVSGIEPLVPFKDVPNAEKMNLFVSKLSLCCVTFDFTDPSKSSADKDVKRKTLVELVDFVACGTMRFSEPAILAICRMCAINLFRVFPPNYRASGGGENDDDEPLFDPAWPHLQLVYELLLKFISSSCIDAKVAKKYIDHSFIARLLELFDSEDPRERDCLKTILHRIYGKFMVHRPYIRKSINNIFYRFVFETDKPNGIGELLEIFGSVITGFALPLKEEHKIFLWRVLVPLHKPKSIGAYFQQLSYCVMQFIEKEPKLASIVIRGLLKYWPATNSQKEVMFLGELEEILEVINMVEFQRIMVPLFRRIGCCINSLHFQVAERALFLWNNDHIVNLIAHNRQVILPIIFSALDRNVQSHWNPAVVNLTNNIRKMFLEMDEKFFISCHNHFKEEEAILISTGEKRKEAWKQLEHAASLRPVTGNTAVLVS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01941 492 MobiDBLite consensus disorder prediction 1 51 - -
Gma17g01941 492 Gene3D - 77 477 IPR011989 -
Gma17g01941 492 PIRSF PP2A_B56 4 490 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gma17g01941 492 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 72 478 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gma17g01941 492 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 492 - -
Gma17g01941 492 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 492 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gma17g01941 492 MobiDBLite consensus disorder prediction 10 27 - -
Gma17g01941 492 SUPERFAMILY ARM repeat 83 474 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01941 Gma-Chr17 34489528 34493191 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01941 K11584 - gmx:100806230 967.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01941 17 34489528 34493191 Gma14g01149 14 17907597 17911073 GST
Gma17g01941 17 34489528 34493191 Gma04g00656 04 6064600 6066957 PCT
Gma17g01941 17 34489528 34493191 Gma06g00649 06 5879677 5882574 PCT
Gma04g00656 04 6064600 6066957 Gma17g01941 17 34489528 34493191 PCT
Gma06g00649 06 5879677 5882574 Gma17g01941 17 34489528 34493191 PCT