Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00656 ATGCTCAAGCAATTCCTCAGCAAACTCCCTCGCAAGGCACCCAAACCCGACTCGGACGAGTCATGCCGAGCCGACTCGTCGCGCTCGGACGATTCCCCACGCGCCGCCAGCAGAAACATCCGCCCTCCCGGCGGCGGAGGCTCCTCCGCCGCGAAGAAAACATCCTCGTCGGCGGTTTTTCCGGCGAGCACGGTGTCGTTGATTGAACCTTTGGTTCCTTTTAAGGATGTTCCGAGTTCAGAGAAGATGAACCTTTTCGTGAGCAAGCTGAGCCTGTGTTGCGTCACGTTCGATTTCACGGACCCTGGTAAGAACACGGTGGAAAAAGAGGTGAAGAGAAGAACCCTCGTTGAGCTCGTTGATTTTGTGTCCTCTTGTGGGTCCTCGAGGTTCAGTGAACCTGCTATTCTTGCTGTTTGCAGAATGTGTGCTATTAATCTCTTTCGCGTTTTCCCGCCAAATTACAGGTCCAATCGTGGTGGTGAGAATGATGATGATGAGCCAGCGTTTGATCCCGCTTGGCCTCATTTGCAGCTGGTGTATGAGTTGCTGCTTAAGTTTATAACCTCAAATTGTCTCGATGCTAAGGTGGCTAAGAAGTACATTGACCATTCGTTTATTTTAAGGTTGTTGGAGTTGTTTGATTCGGAGGATCCTAGGGAGAGGGACTGCTTGAAGACGATTCTGCATAGGGTTTATGGCAAGTTCATGGTGCATAGGCCCTACATAAGGAAATCAATTAACAACTTGTTCTATAACTTTGTGTTTGAGACCGAGAGGCACAATGGGATTGCGGAGTTGTTGGAGATTTTTGGGAGCATAATTAGCGGGTTTGCTTTGCCTTTGAAGGAGGAGCACAAGATCTTCTTGTGGAGGGTTTTGATTCCCTTGCACAAGCCCAAGTCTATTGGGGTGTACTTCCAGCAGTTGTCTTATTGCGTTACACAGTTTATAGAGAAAGAGCCCAAGTTGGCAAGCATTGTGATAAGGGGGATGTTGAAGTATTGGCCGATAACGAACAGTCAGAAAGAGGTGATGTTCCTGGGTGAACTGGAGGAAATTTTGGAAACAATTAACATGGTAGAGTTTCAGAGGGTCATGGTCCCGTTGTTTTGGCGGATTGGATGCTGCATTAACAGTTTGCACTTCCAGGTAGCTGAAAGAGCCCTTTTCTTATGGAACAACGACCATATTGTCAACTTGATTGCTCACAACCGACAAGTGATCCTGCCAATCATATTTCCAGCCTTAGAGAAGAATTCTCAGGGCCACTGGAGCCAGTCAGTGCTCAACCTAACTTATAACGTGAGAAAAATGTTTGTAGAGATGGATGAGAAGCTGTTCCTGGCTTCTCATTCTCAATTCAAGGAAGAAGAAGTAATGCTAAACATGGCGGCAGAGAAGCGGAAGGAAGCGTGGAAACAACTCGAGCATGCAGCCAGTCTCCAGCCTGCGATTGGAAATACCCCAGTTTTAGTATCTCCAATTTGA 1491 0.4755 MLKQFLSKLPRKAPKPDSDESCRADSSRSDDSPRAASRNIRPPGGGGSSAAKKTSSSAVFPASTVSLIEPLVPFKDVPSSEKMNLFVSKLSLCCVTFDFTDPGKNTVEKEVKRRTLVELVDFVSSCGSSRFSEPAILAVCRMCAINLFRVFPPNYRSNRGGENDDDEPAFDPAWPHLQLVYELLLKFITSNCLDAKVAKKYIDHSFILRLLELFDSEDPRERDCLKTILHRVYGKFMVHRPYIRKSINNLFYNFVFETERHNGIAELLEIFGSIISGFALPLKEEHKIFLWRVLIPLHKPKSIGVYFQQLSYCVTQFIEKEPKLASIVIRGMLKYWPITNSQKEVMFLGELEEILETINMVEFQRVMVPLFWRIGCCINSLHFQVAERALFLWNNDHIVNLIAHNRQVILPIIFPALEKNSQGHWSQSVLNLTYNVRKMFVEMDEKLFLASHSQFKEEEVMLNMAAEKRKEAWKQLEHAASLQPAIGNTPVLVSPI 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00656 496 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 494 - -
Gma04g00656 496 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 73 480 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gma04g00656 496 PIRSF PP2A_B56 4 493 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gma04g00656 496 SUPERFAMILY ARM repeat 84 476 IPR016024 -
Gma04g00656 496 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 494 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gma04g00656 496 MobiDBLite consensus disorder prediction 1 55 - -
Gma04g00656 496 MobiDBLite consensus disorder prediction 10 35 - -
Gma04g00656 496 Gene3D - 78 479 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00656 Gma-Chr4 6064600 6066957 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00656 K11584 - gmx:100775273 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00656 04 6064600 6066957 Gma06g00649 06 5879677 5882574 GST
Gma17g01941 17 34489528 34493191 Gma04g00656 04 6064600 6066957 PCT
Gma14g01149 14 17907597 17911073 Gma04g00656 04 6064600 6066957 PCT
Gma04g00656 04 6064600 6066957 Gma17g01941 17 34489528 34493191 PCT
Gma04g00656 04 6064600 6066957 Gma14g01149 14 17907597 17911073 PCT