Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00649 ATGCTCAAGCAATTCCTCAGCAAACTCCCTCGCAAGGCACCGAAACCCGACTCGGACGAGTCATGCCGAGCCGACTCGTCGAGCTCGGACGATTCCCCACACGCCGCCGGCAGAAACACCCGCCCTCCCGGCGGCGGAGGAGCTTCCGGCGCCGCGAAGAAAGCATCCTCGTCGGCGGTTTTTCCGGCGAGCACGGTGTCGTTGATTGAACCTTTGGTGCCGTTTAAGGATGTTCCGAGTTCCGAAAAGATGAACCTTTTCGTGAGCAAGCTTAGCCTGTGTTGTGTCACGTTCGATTTCACGGACCCTGGTAAGAACACGGTGGAGAAAGAGGTGAAGAGAAGAACCCTTGTTGAACTCGTTGATTTCGTTTCCTCTTGTGGGTCCTCGAGGTTCGGTGAACCTGCTATTCTTGCTGTTTGCAGAATGTGTGCTATTAATCTCTTCCGTGTTTTCCCGCCAAATTATAGGTCCAATCGTGGTGGTGAGAATGATGATGATGAGCCAGCATTTGATCCCGCTTGGCCTCATTTGCAGCTTGTGTATGAATTGCTGCTTAAGTTTATAACCTCAAATTGTCTCGATGCTAAGGTGGCTAAGAAGTACATTGACCATTCGTTTATTTTAAGTTTGTTGGAGTTGTTTGATTCGGAGGATCCTAGGGAGAGGGACTGCTTGAAGACGATTCTGCATAGGGTTTATGGCAAGTTCATGGTGCATAGGCCCTACATAAGGAAATCTATTAACAACTTGTTTTATAAGTTTGTGTTTGAGACTGAGAGGCACAATGGGATTGCGGAGTTGTTGGAGATCTTTGGGAGCATAATTAGTGGGTTTGCTTTGCCTCTGAAGGAGGAGCACAAGATCTTCTTGTGGAGGGTTTTGATCCCCTTGCACAAGCCCAAGTCTATCGGGGTGTACTTCCAGCAGTTGTCTTATTGCGTTACGCAGTTTATCGAGAAAGAGCCCAAGTTGGCAAGCATTGTGATAAGGGGGATGTTGAAGTATTGGCCTGTAACCAACAGTCAGAAAGAGGTGATGTTCCTGGGTGAACTGGAGGAAATTTTGGAAACAATTAACATGGTAGAGTTCCAGAGGGTCATGGTCCCGTTGTTTTGGCGGATTGGATGCTGCATTAACAGTTTGCACTTCCAGGTAGCTGAAAGAACCCTTTTCTTATGGAACAACGACCATATTGTCAACTTGATCGCTCACAACCGACAAGTGATCCTGCCAATCATATTTCCAGCCTTAGAGAAGAATTCTCAGGGCCACTGGAGCCAGGCAGTGCTCAACCTAACTCATAACGTGAGAAAAATGTTTGTGGAGATGGATGAGAAGCTGTTCCTGGCTTCTCATTCTCAGTTCAAGGAAGAAGAAGCAATGCTAAACACAGCAGCGGAGAAGCGGAAGGAAGCATGGAAACAACTAGAGCATGCAGCCAGTCTCCAGCCTGTGACTGGAAATACCCCAGTTTTAGTGTCTCCAATTTGA 1494 0.4786 MLKQFLSKLPRKAPKPDSDESCRADSSSSDDSPHAAGRNTRPPGGGGASGAAKKASSSAVFPASTVSLIEPLVPFKDVPSSEKMNLFVSKLSLCCVTFDFTDPGKNTVEKEVKRRTLVELVDFVSSCGSSRFGEPAILAVCRMCAINLFRVFPPNYRSNRGGENDDDEPAFDPAWPHLQLVYELLLKFITSNCLDAKVAKKYIDHSFILSLLELFDSEDPRERDCLKTILHRVYGKFMVHRPYIRKSINNLFYKFVFETERHNGIAELLEIFGSIISGFALPLKEEHKIFLWRVLIPLHKPKSIGVYFQQLSYCVTQFIEKEPKLASIVIRGMLKYWPVTNSQKEVMFLGELEEILETINMVEFQRVMVPLFWRIGCCINSLHFQVAERTLFLWNNDHIVNLIAHNRQVILPIIFPALEKNSQGHWSQAVLNLTHNVRKMFVEMDEKLFLASHSQFKEEEAMLNTAAEKRKEAWKQLEHAASLQPVTGNTPVLVSPI 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00649 497 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 74 481 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gma06g00649 497 MobiDBLite consensus disorder prediction 10 27 - -
Gma06g00649 497 MobiDBLite consensus disorder prediction 1 53 - -
Gma06g00649 497 SUPERFAMILY ARM repeat 85 477 IPR016024 -
Gma06g00649 497 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 495 - -
Gma06g00649 497 Gene3D - 79 480 IPR011989 -
Gma06g00649 497 PIRSF PP2A_B56 4 494 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gma06g00649 497 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 495 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00649 Gma-Chr6 5879677 5882574 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00649 K11584 - gmx:100808283 963.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00656 04 6064600 6066957 Gma06g00649 06 5879677 5882574 GST
Gma17g01941 17 34489528 34493191 Gma06g00649 06 5879677 5882574 PCT
Gma14g01149 14 17907597 17911073 Gma06g00649 06 5879677 5882574 PCT
Gma06g00649 06 5879677 5882574 Gma17g01941 17 34489528 34493191 PCT
Gma06g00649 06 5879677 5882574 Gma14g01149 14 17907597 17911073 PCT