Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01399 ATGAAAACAAGGAGAGGAAAACGCTCAGAGGCCTTTTGGCCTTCCCTTGTGATGAAGAAATGGTTAAACATAAAGCCAAAGGAGTATGATTTTAGTGAAGACGAAGTGGACACTGAAACTGAGAGTGAAGATGATGCTTGCTCTCTTAAAGATTCAAGACTTGGCGTGCGTGAAGATAATCGTCCACTTAGAGCACAATCCATATTCCCAAGTCAAATATCAGACACACCGTGTAAGGGCTACAATACAAAACATAGAAGAGGGAAATCAGAAACTCTGCGTGTTCAATACATAAATACAAAGGAACTGAGGGTAACAATTGGCACATGGAATGTTGCTGGAAGAGCTCCAAGTAAGGATCTTGACATTGAGGACTGGCTTTGTACCAATGAGCCAGCAGATATTTACATTATTGGTTTCCAAGAGGTTGTCCCCCTGAGTGCTGGAAATGTTCTAGGGGCTGAGGATAACACACCCATCCGCAAATGGGAAGCGATCATCCGAAGAACTCTAAACAAATCTTCTGAACCTGAAAGCAAGCACAAAAGCTACAGTGCCCCTCATTCTCCTGTTCAAAAAACTTCTTCTTCTGCTTCTGTTAATGCTCTAGCAGACAGTGTAGATGTTAATCCACTAGACATGATGAATGAGGAGTATTTAGGAACTTTTGACAATGATGATCTAGAACAAGAGGAACAGAAAAGCAGCATATTCGGTATAGGAAAGAATTTACAGCTGAGGAAAATACATGACATTGATCTTCAGACTATACTTGACTGGCCTGAACGTCCATTAGATGCAACTCCACATACTGATTCCAGTCCGAAATTGCGCCGAGTACTAAGCAGCTCAGAGAGAACCGGCTTTAGCTGGACAGATACTGCTTCAAAATATTCGAATGCAATGAAACGGTCACACCATAGTTCTGGAAATTTGGGCTTGTTATGGAAAGAGCAGAAAGTGATGCCTGAAGAAGTAATTGATATTATTGACGACTTATCTGACATGCTATCAGACGAGGAAGATGATGATGATTATTTTGAAGTAGCAAATGACAAAGAAGTTAATGGAATAAGTAAGGTGAAATCTCATCGTAAATATGTCCGGATTGTCAGCAAGCAGATGGTAGGAATATATGTGTCTGTTTGGGTGCAAAGGAGGTTGAGAAGGCACATTAATAACTTGAAAGTTTCTCCAGTTGGAGTTGGTCTTATGGGCTACATGGGAAACAAGGGGTCTGTTTCAGTTAGTATGTCTCTCTTTCAGTCACGTTTGTGCTTTGTTTGTTCCCATCTGACTTCTGGCCAGAAGGATGGGGCAGAAATAAGACGAAACGCAGACGTTCATGAAATTCTCCGCCGCACTTGTTTCTCATCCGTCTTTGATACAGATCAACCACAAACAATCCCATCTCATGATCAAATTTTCTGGTTTGGGGATTTGAATTATCGTATCAATATGATGGATGGGGAGGTTCGAAAGCTGGTAGCTCTAAAGAATTGGGATGAACTGATGAATTACGATCAGCTAAGTAATGAATTACGTAGTGGTCATGTGTTTGATGGATGGAAAGAGGGGTTGATAAACTTCCCACCCACATACAAGTATGATTTTAATTCTGATAAATACATTGGTGAGAACCCAAAAGAAGGGGAAAAGAAGAGATCTCCAGCCTGGTGTGATCGTATATTGTGGTTAGGAAAAGGAATAAAGCAACTTCAATACAGGCGTTCAGAAAATAAGCTCTCAGATCATCGACCAGTTAATTCAATATTCGCTGTTGATGTTGAAGTATTTGACCACCGCAAACTACAACGAGCACTGAATTTTACAAATGCAGCAGTACACCCTGAGGTTTTCCTTAAAGAAGATGGAGATTGGTCATATTAG 1890 0.4074 MKTRRGKRSEAFWPSLVMKKWLNIKPKEYDFSEDEVDTETESEDDACSLKDSRLGVREDNRPLRAQSIFPSQISDTPCKGYNTKHRRGKSETLRVQYINTKELRVTIGTWNVAGRAPSKDLDIEDWLCTNEPADIYIIGFQEVVPLSAGNVLGAEDNTPIRKWEAIIRRTLNKSSEPESKHKSYSAPHSPVQKTSSSASVNALADSVDVNPLDMMNEEYLGTFDNDDLEQEEQKSSIFGIGKNLQLRKIHDIDLQTILDWPERPLDATPHTDSSPKLRRVLSSSERTGFSWTDTASKYSNAMKRSHHSSGNLGLLWKEQKVMPEEVIDIIDDLSDMLSDEEDDDDYFEVANDKEVNGISKVKSHRKYVRIVSKQMVGIYVSVWVQRRLRRHINNLKVSPVGVGLMGYMGNKGSVSVSMSLFQSRLCFVCSHLTSGQKDGAEIRRNADVHEILRRTCFSSVFDTDQPQTIPSHDQIFWFGDLNYRINMMDGEVRKLVALKNWDELMNYDQLSNELRSGHVFDGWKEGLINFPPTYKYDFNSDKYIGENPKEGEKKRSPAWCDRILWLGKGIKQLQYRRSENKLSDHRPVNSIFAVDVEVFDHRKLQRALNFTNAAVHPEVFLKEDGDWSY 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01399 629 MobiDBLite consensus disorder prediction 172 200 - -
Gma17g01399 629 MobiDBLite consensus disorder prediction 185 200 - -
Gma17g01399 629 SUPERFAMILY DNase I-like 95 611 IPR036691 -
Gma17g01399 629 SMART i5p_5 289 600 IPR000300 GO:0016791|GO:0046856
Gma17g01399 629 Gene3D Endonuclease/exonuclease/phosphatase 83 195 IPR036691 -
Gma17g01399 629 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 7 623 - -
Gma17g01399 629 Pfam Endonuclease/Exonuclease/phosphatase family 108 585 IPR005135 GO:0003824
Gma17g01399 629 Gene3D Endonuclease/exonuclease/phosphatase 321 619 IPR036691 -
Gma17g01399 629 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 7 623 IPR045849 GO:0004445|GO:0046855
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01399 Gma-Chr17 13035698 13042243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01399 367 623 Acyl Lipid Metabolism Gene Families AT1G65580 31.000 2.35e-34 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01399 K24221 - gmx:100794203 1238.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01399 17 13035698 13042243 Gma05g00666 05 7434283 7440998 GST
Gma01g02033 01 55733041 55739115 Gma17g01399 17 13035698 13042243 PCT
Gma11g00379 11 3085835 3089726 Gma17g01399 17 13035698 13042243 PCT
Gma17g01399 17 13035698 13042243 Gma01g02033 01 55733041 55739115 PCT
Gma17g01399 17 13035698 13042243 Gma11g00379 11 3085835 3089726 PCT