Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00379 ATGAAAGCAAGGAGAGGAAAACGCTCAGAGGCTTTCTGGCCTTCCATTGTGATGAAAAAATGGTTAAACATCAAGCCTAAGGTGAATGATTTTAGTGAAGATGAAGTTGACACTGAAACTGAAAGTGAAGATGATGCTTGCTCAATTAGAGGCTCAAGAATGTGTGTGCGTGAAGATAATCCACATCCACTTAGAACAGAAGGGGTTCAATCCATATTCTCAAATGCATCATCTCCTTGTAAAGGCCGCAAGACAAGACATAGAAGAGGAAAGTCAGAAACTCTGCGTGCTCAGTACATAAACACGAAGGACGTGAGGGTAACTATTGGCTCTTGGAATGTTGCTGGAAGACATCCATGTGAGGATCTTGAGATGGATGACTGGCTATGTACGGAAGACCCAGCTGATATTTACATTATTGGTTTCCAGGAGGTAGTTCCATTGAATGCTGGAAATGTGCTAGGAGCAGAAGATAATACACCTATCCCAAAATGGGAGGCAATCATTCGAAGATGTCTAAACAAATCTTCTGAGCCTGACAGTAAACACAAAAGCTACAGTGCCCCTCCTTCTCCAGTGTTAAGAACCTCTTCTGCTGCTGATCTTCTAGCAGACACAATAGATGCTGATAATCCAATTCCAATAGATATGACGATTGAGGAGTATGTAGCAACAGTTGATAATAATGAGGTGGAGCAGCAGGAAGTGAAAAGCATAATTGACATAGAGAATAACTTACAGTTGAGGAGAGTATTTGGCATTGATATTGACTGGCCTGAACGTTCCTTAGATGCAATCCCCCAAATTGTTGATTCCAATTCAAAGTTGCGGAGAGTACTAAGCAGCTCAGCCAGAATTGGCTTTAACAGGACTGAGAGTAGTTTGGTATATGGTGTTGGATTGAAACGTTCACACCGCAGTTCTGGAAATTTGGGCTTGTTATGGCAACAACAACAAGTGATACCTGAAGTCGTTGATTCCTTAGAAGATGTCTCTGATGTGTTATCAGCTGAGGGTGGTGATACTTTTATTGTACCGAATGACGAAGATGAAGATGAATTTGGTACCACAGAATCTTGTCCAAGTACAAGGTATGTCCGAATTGTGAGCAAGCAAATGGTAGGGATATATGTATCTGTTTGGGTTCAGAGGAGGTTGAGAAGGCACATTAATAATTTAAAAGTTTCCCCGGTTGGAGTTGGACTTATGGGCTACATGGGAAACAAGGGGTCAGTTTCGATTAGTATGTCTCTCTTTCAGTCACGTATGTGCTTTGTTTGTTCCCATTTGACTTCTGGTCAGAAGGAAGGGGCTGAACATAGGCGAAACTCTGATGTTCATGAAATTCTAAGACGCACTTGCTTCTCATCATCTGTATTTGACGCAGATCAACCACAAACAATACCATCTCATGACCAGATTTTCTGGTTCGGGGATTTGAATTATCGTATCAATATGTTGGATGCTGAGGTTAGAAAATTGGTGGCTCTAAGGAAGTGGGATGAGTTGAAGAATTATGATCAGCTAAGCAAAGAATTGCGTATGGGGCATGTATTTGATGGATGGAAAGAGGGGTTGATAAACTTCCCACCCACTTACAAGTATGAATTTAACTCTGATAGATATGTCGGTGAGAGCCCAAAAGAAGGGGAAAAAAGAAGATCTCCAGCCTGGTGCGATCGTATATTGTGGCTAGGAAAAGGAATAAAACAATTACAATATGGACGTGCAGAAATTAAGCTCTCAGATCATAGACCAGGCAGCAGTACACCCAGAGATCTTCCTTGA 1788 0.4161 MKARRGKRSEAFWPSIVMKKWLNIKPKVNDFSEDEVDTETESEDDACSIRGSRMCVREDNPHPLRTEGVQSIFSNASSPCKGRKTRHRRGKSETLRAQYINTKDVRVTIGSWNVAGRHPCEDLEMDDWLCTEDPADIYIIGFQEVVPLNAGNVLGAEDNTPIPKWEAIIRRCLNKSSEPDSKHKSYSAPPSPVLRTSSAADLLADTIDADNPIPIDMTIEEYVATVDNNEVEQQEVKSIIDIENNLQLRRVFGIDIDWPERSLDAIPQIVDSNSKLRRVLSSSARIGFNRTESSLVYGVGLKRSHRSSGNLGLLWQQQQVIPEVVDSLEDVSDVLSAEGGDTFIVPNDEDEDEFGTTESCPSTRYVRIVSKQMVGIYVSVWVQRRLRRHINNLKVSPVGVGLMGYMGNKGSVSISMSLFQSRMCFVCSHLTSGQKEGAEHRRNSDVHEILRRTCFSSSVFDADQPQTIPSHDQIFWFGDLNYRINMLDAEVRKLVALRKWDELKNYDQLSKELRMGHVFDGWKEGLINFPPTYKYEFNSDRYVGESPKEGEKRRSPAWCDRILWLGKGIKQLQYGRAEIKLSDHRPGSSTPRDLP 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00379 595 SUPERFAMILY DNase I-like 96 586 IPR036691 -
Gma11g00379 595 Gene3D Endonuclease/exonuclease/phosphatase 324 590 IPR036691 -
Gma11g00379 595 SMART i5p_5 288 595 IPR000300 GO:0016791|GO:0046856
Gma11g00379 595 Gene3D Endonuclease/exonuclease/phosphatase 85 189 IPR036691 -
Gma11g00379 595 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 7 590 - -
Gma11g00379 595 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 7 590 IPR045849 GO:0004445|GO:0046855
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00379 Gma-Chr11 3085835 3089726 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00379 365 564 Acyl Lipid Metabolism Gene Families AT1G05630 34.956 9.89e-36 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00379 K24221 - gmx:100785439 1166.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02033 01 55733041 55739115 Gma11g00379 11 3085835 3089726 GST
Gma11g00379 11 3085835 3089726 Gma17g01399 17 13035698 13042243 PCT
Gma11g00379 11 3085835 3089726 Gma05g00666 05 7434283 7440998 PCT
Gma17g01399 17 13035698 13042243 Gma11g00379 11 3085835 3089726 PCT
Gma05g00666 05 7434283 7440998 Gma11g00379 11 3085835 3089726 PCT