Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02033 ATGAAGGCAAGGAGAGGAAAACGCTCAGAGGCTTTCTGGCCTTCCATTGTGATGAAAAAATGGTTAAACATCAAGCCTAAGGTGAATGATTTTAGTGAAGATGAAGTGGACACTGAAACTGAAAGTGAAGATGATGCTTGTTCAATTAGAGGCTCAAGAATGTGTGTGCGTGAAGATAATCCACATCCACTTAGAACAGAAGGGGTTCAATCCATATTCCCAAGTGTAACATCAGATGCATCTCCTTGTAAGGGCCGCAAGACAAGACACAGAAGAGGAAAATCAGAAACTCTGCGTGCTCAGTACATAAACACGAAGGAAATGAGGGTAACAATTGGCACATGGAATGTTGCTGGAAGACATCCATGTGAGGATCTTGAGATTGATGACTGGCTTTGTACCGAAGACCCAGCTGATATTTACATTATTGGTTTCCAGGAGGTAGTTCCATTGAATGCTGGAAATGTGTTAGGAGCAGAAGATAATACACCTATCCCAAAATGGGAGGCAATCATTCGAAGATCTCTAAACAAATCTTCTGAGCCTGACAGTAAACATAAAAGCTACAGTGCCCCCCCTTCTCCAGTGTTAAGAACTTCTTCTGCTGCTGATCTTCTTGCAGATACTATAGATGCTGATAATCCAATTCCAATAGATATGATGATTGAGGAGTATGTAGCAACAGTTGATAATAATGAGATGGAACAGCAGGAAGTGAAAAGCATAATTGATATAGAGAATAACCTACAGTTGAGGAGAATATATGGAATTGATATTGACTGGCCTGAACATTCATTAGATGCAGTCCCCCAAATTGTTGATTCCAATTCAAAGTTGCGGAGAGTACTAAGCAGCTCAGCCAGAATTGGATTTAGCAGAGCTGAGAGTGGTTTGGTATATGGTGTTGGATTGAAACGTTCACACCACAGTTCTGGAAATTTGGGCTTGTTATGGCAACAACAACAAGGGATACCTGAAGTAGTTGATTCCTTAGAAGATGTCTCTGATGTGCTATCAGCTGAGGATGGTGATACTTTTATTGTACCAAATAACGAAGATGATGATGAATTTGGTACCACAGAATCTTGTCCAAGTCCAAGGTATGTCCGGATTGTGAGCAAGCAAATGGTAGGGATATATGTATCTGTTTGGGTTCAGAGGAGGTTGAGAAGGCACATTAACAATTTGAAAGTTTCCCCGGTTGGAGTTGGACTTATGGGCTACATGGGAAACAAGGGGTCAGTTTCCATTAGTATGTCTCTCTTTCAGTCACGTATGTGCTTTGTTTGTTCCCATTTGACTTCTGGTCAGAAGGAAGGGGCTGAACATAGGCGAAACTCTGATGTTCATGAAATTCTAAGACGCACTTGCTTCTCATCATCTGTCTTCGATGCAGATCAACCACAAACAATCCCATCTCATGACCAGATTTTCTGGTTCGGGGATTTGAATTATCGTATCAATATGTTGGATGCTGAGGTTAGAAAATTGGTTGCTCTAAAGAAGTGGGATGAGTTGAAGAATTATGATCAGCTAAGCAAAGAATTGCGTATGGGGCATGTATTTGATGGATGGAAAGAGGGGTTGATAAACTTCCCACCCACTTACAAGTATGAAATTAACTCTGATAGATATGTTGGTGAGAGGCCAAAAGAAGGGGAAAAAAGAAGATCTCCAGCCTGGTGTGATCGTATATTGTGGCTAGGCAAAGGAATAAAACAACTACAATATGGACGTGCAGAAATTAAGCTCTCGGATCATAGACCAGTTAGTTCAGCCTTCTTGGTTGAAGTTGAAGTATTCGACCATCGCAAGCTAAAGAGAGCTCTAAATTTCACTAGGGCAGCAGTACACCCAGAGATCTTCCTTGATGAAGATGGAGAAATATAA 1890 0.4111 MKARRGKRSEAFWPSIVMKKWLNIKPKVNDFSEDEVDTETESEDDACSIRGSRMCVREDNPHPLRTEGVQSIFPSVTSDASPCKGRKTRHRRGKSETLRAQYINTKEMRVTIGTWNVAGRHPCEDLEIDDWLCTEDPADIYIIGFQEVVPLNAGNVLGAEDNTPIPKWEAIIRRSLNKSSEPDSKHKSYSAPPSPVLRTSSAADLLADTIDADNPIPIDMMIEEYVATVDNNEMEQQEVKSIIDIENNLQLRRIYGIDIDWPEHSLDAVPQIVDSNSKLRRVLSSSARIGFSRAESGLVYGVGLKRSHHSSGNLGLLWQQQQGIPEVVDSLEDVSDVLSAEDGDTFIVPNNEDDDEFGTTESCPSPRYVRIVSKQMVGIYVSVWVQRRLRRHINNLKVSPVGVGLMGYMGNKGSVSISMSLFQSRMCFVCSHLTSGQKEGAEHRRNSDVHEILRRTCFSSSVFDADQPQTIPSHDQIFWFGDLNYRINMLDAEVRKLVALKKWDELKNYDQLSKELRMGHVFDGWKEGLINFPPTYKYEINSDRYVGERPKEGEKRRSPAWCDRILWLGKGIKQLQYGRAEIKLSDHRPVSSAFLVEVEVFDHRKLKRALNFTRAAVHPEIFLDEDGEI 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02033 629 SUPERFAMILY DNase I-like 99 614 IPR036691 -
Gma01g02033 629 Gene3D Endonuclease/exonuclease/phosphatase 88 192 IPR036691 -
Gma01g02033 629 Gene3D Endonuclease/exonuclease/phosphatase 332 620 IPR036691 -
Gma01g02033 629 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 7 625 IPR045849 GO:0004445|GO:0046855
Gma01g02033 629 SMART i5p_5 293 602 IPR000300 GO:0016791|GO:0046856
Gma01g02033 629 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 7 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02033 Gma-Chr1 55733041 55739115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02033 368 567 Acyl Lipid Metabolism Gene Families AT1G05630 34.513 4.00e-35 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02033 K24221 - gsj:114422956 1247.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02033 01 55733041 55739115 Gma11g00379 11 3085835 3089726 GST
Gma01g02033 01 55733041 55739115 Gma17g01399 17 13035698 13042243 PCT
Gma01g02033 01 55733041 55739115 Gma05g00666 05 7434283 7440998 PCT
Gma17g01399 17 13035698 13042243 Gma01g02033 01 55733041 55739115 PCT
Gma05g00666 05 7434283 7440998 Gma01g02033 01 55733041 55739115 PCT