Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01365 ATGGCGAACCGTGATCAGCTTGTGAATGGCAAGGGCTCAAAGTTTTCGCTTCTTCACAACAACAACCTCGCCTTAAATGATGCTGACAAGTCCCATGTTTGGTCCTCAAACACCGTTTCATTGTCCTCCTCTATGCTTTTGTTCCTCGACAACACCGGCAACCTCGTTCTCCGCCAAACGAAGAGTACCGGTGTCGTTTTGTGGCTAAGCTTTGATTTCCCTACAGATACGCTTTTACCTCAACAAGTGTTCACGAGACACGCGAAACTCTTCTACCTCCGTCGCCGTACTCGCTCCGATACCAAGTTTCTGAACACGCACGCTTTCGAAGAGGGTAAGTTCGAGTACACCGGTACTGTGCTGTGCTGCCTTACCTGCATTTCTTCCATAATGGGCTGCATGAACTCGAAGTCTGTGAGGAAGTTTCCGGCACGGGAGGATTCTCTTGATCTTGCAGCGGAGACAGCTTTTACTGTCAATGAGGTTGAAGCACTGTTTGTGCTTTTTAGGAGCATCAGCAATTCTATTGTCAATGATGGACTGCTAAGCAAGGAAGAATTTCAATTGGCAATCTTCAAAAACAAGAAAAAGGATAACATTTTTGCAAATCGGATCTTTGATTTATTTGATGTCAAGAAGCTTGGAGTCGTTGACTTCGAAGACTTTGTCAGATCTCTCAATGTTTTCCACCCAAATGCTTCATTAAAAGACAAGATAGCTTTTTCATTTAGGCTCTATGATTTGCACAATACTGGCTTTATAGAGCGCCCTGAGGTCAAGGAAATGTTAATTGCACTTCTTTTTGAGTCGGATATGAAGTTGGCAGATGATGTCATAGAAACAATTCTTGACAAGACTTTCGTGGAAGCTGACCTAAAGCAAGATGGGAAAATCGACACTGAAGAGTGGGAAACTTTTGTTAAAAGGAATCCGTCAGTATTAAAAATCATGACCCTACCTTATCTGAGGGACATAACAATATCTTTCCCAAGTTTTATTTTTAATAGCACTAACGTGGAAAGGGTTGATGAAACAAGTACAAGGCTTTAG 1050 0.4257 MANRDQLVNGKGSKFSLLHNNNLALNDADKSHVWSSNTVSLSSSMLLFLDNTGNLVLRQTKSTGVVLWLSFDFPTDTLLPQQVFTRHAKLFYLRRRTRSDTKFLNTHAFEEGKFEYTGTVLCCLTCISSIMGCMNSKSVRKFPAREDSLDLAAETAFTVNEVEALFVLFRSISNSIVNDGLLSKEEFQLAIFKNKKKDNIFANRIFDLFDVKKLGVVDFEDFVRSLNVFHPNASLKDKIAFSFRLYDLHNTGFIERPEVKEMLIALLFESDMKLADDVIETILDKTFVEADLKQDGKIDTEEWETFVKRNPSVLKIMTLPYLRDITISFPSFIFNSTNVERVDETSTRL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01365 349 ProSiteProfiles EF-hand calcium-binding domain profile. 278 313 IPR002048 GO:0005509
Gma17g01365 349 PRINTS Recoverin family signature 298 318 - -
Gma17g01365 349 PRINTS Recoverin family signature 205 226 - -
Gma17g01365 349 PRINTS Recoverin family signature 252 270 - -
Gma17g01365 349 Pfam D-mannose binding lectin 2 87 IPR001480 -
Gma17g01365 349 Pfam EF-hand domain pair 237 307 IPR002048 GO:0005509
Gma17g01365 349 Gene3D - 2 113 - -
Gma17g01365 349 SUPERFAMILY EF-hand 151 331 IPR011992 -
Gma17g01365 349 PANTHER BNAC07G34450D PROTEIN 131 340 - -
Gma17g01365 349 Gene3D - 148 341 - -
Gma17g01365 349 SUPERFAMILY alpha-D-mannose-specific plant lectins 2 99 IPR036426 -
Gma17g01365 349 SMART efh_1 201 229 IPR002048 GO:0005509
Gma17g01365 349 SMART efh_1 238 266 IPR002048 GO:0005509
Gma17g01365 349 SMART efh_1 282 310 IPR002048 GO:0005509
Gma17g01365 349 ProSiteProfiles Bulb-type lectin domain profile. 1 70 IPR001480 -
Gma17g01365 349 ProSiteProfiles EF-hand calcium-binding domain profile. 197 232 IPR002048 GO:0005509
Gma17g01365 349 ProSiteProfiles EF-hand calcium-binding domain profile. 234 269 IPR002048 GO:0005509
Gma17g01365 349 PANTHER CALCINEURIN B 131 340 IPR045198 GO:0005509|GO:0019722|GO:0019900
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01365 Gma-Chr17 12562000 12568453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01365 131 347 EF-hand Containing Proteins AT4G17615 68.664 1.09e-105 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01365 K06268 - gmx:100811767 429.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01365 17 12562000 12568453 Gma17g01365 17 12562000 12568453 ECH
Gma17g01365 17 12562000 12568453 Gma05g00625 05 6757835 6771391 GST
Gma11g00351 11 2811100 2813221 Gma17g01365 17 12562000 12568453 PCT
Gma17g01365 17 12562000 12568453 Gma11g00351 11 2811100 2813221 PCT