Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01362 ATGTCTAACATCCACACTGCAACAAGCAGCATGAAAAGGTTGTCAAGTTATTTGCATTCCCTATCCCAAACCCCTCACAGGCTCAGAAAGAGAATGCTAGCCACTTGGACCCCAGAACAGGAATTCAACCAAGTGAGGCACAGATCTGGTGCTGACATGAAGAGGAAGCTCAAGTGGCATGATCTTGTGGCTCTTGGTGTTGGAGGAATGCTTGGTGTTGGAGTCTTTGTCACTACTGGCTCTGTTGCCCTTCACCACTCTGGTCCTTCAGTCTTCATTTCCTACATCATAGCAGGAATTTCAGCCCTTCTCTCCTCTTTGTGTTACACTGAATTTGCTGTTCAAGTACCAGTTGCTGGAGGAGCTTTCAGTTATTTAAGATTAACTTTTGGGGAATTCTTGGGATATTTTGCTGGGGCAAATATACTAATGGAGTATGTGTTCTCAAACGCTGCCGTGGCAAGGAGCTTCACAGAATATTTGAGCATTGCATTTGGAGAAAATGATCCAAATGTGTGGAGAGTGGAAGTCCCTGGCTTGCCAAAGGATTATAACATGCTGGATTTTCCAGCAGTGGCTCTCATTCTTATTCTCACTCTCTTCTTGTGTCATAGTACAAAGGAAAGCTCCATGTTGAACCTCATTATGACAGCCTTTCATATTATTTTCTTTGGATTCATCATAATCGCTGGTTATTGCAATGGAAGTGCCAAAAACTTGGTTTCTCCAAAAGGACTAGCTCCTTTTGGTGCTAGAGGTGTTCTTGATGGAGCAGCAATAGTCTACTTCAGTTATATAGGCTATGACTCAGCTTCAACCATGGCTGAGGAGGTTACAGACCCTTTTAAGAGCCTACCCATTGGAATTGTGGGTTCAGTTCTTATAACCACTTTGCTTTATTGCCTAATGGCTCTGTCTTTGTGCATGATGGTTCCTTACAACAAGATATCAGAGAAAGCATCATTTTCAATAGCTTTTCTGAAAATTGGTTGGAATTGGGCAAGCAACCTTGTTGGGGCAGGTGCAAGTTTGGGAATAGTGGCTTCTCTCTTGGTTGCCATGTTAGGCCAAGCAAGATACCTTTGTGTTATAGGAAGGGCACGGCTTGTGCCATCTTGGTTAGCCAAAGTGCATCCTTCAACCGGCACACCATTGAATGCCACGGTCTTTTTGGGACTTTGCACAGCAACAATTACACTATTCACCGAGCTTGACATTATAATTGAGTTGATTAGCATCGGCACACTGTTGGTGTTCTACATGGTAGCCAACGCTCTTATATACCGTCGATATGTAATCACTAGCCATGCCCCACCTACGCACACTCTCGTTTTCCTCTTTCTCCTTTCCCTAAGTGCACTATGCTTCTCCCTTGCGTGGAAGTTCAAGCAGCAATGGTGGGTTCTCCTACTTTTTGGCGGGTTTATGATCGCCATCACTGCCTTCTTTCAACACGTGGTACTTACTACGACTACTACTATTCATTGGTCCGTGCCATTCATGCCATGGCCACCCGCCATGTCCATCTTCCTTAACGTTTTCCTCATGACAACCCTCAAAATCCTCTCTTTCCAACGATTTGCCATATGGGCATGTCTCATTACAATCTTCTACGTGCTCTATGGCGTCCACAACACTTATGAGGCTGAGGAGACTGAGAATGAAGTGGATTCAAGTGTAAACAACTTGCATACCAAGGTAGAAATTATTCAAGTGCACTAA 1722 0.4413 MSNIHTATSSMKRLSSYLHSLSQTPHRLRKRMLATWTPEQEFNQVRHRSGADMKRKLKWHDLVALGVGGMLGVGVFVTTGSVALHHSGPSVFISYIIAGISALLSSLCYTEFAVQVPVAGGAFSYLRLTFGEFLGYFAGANILMEYVFSNAAVARSFTEYLSIAFGENDPNVWRVEVPGLPKDYNMLDFPAVALILILTLFLCHSTKESSMLNLIMTAFHIIFFGFIIIAGYCNGSAKNLVSPKGLAPFGARGVLDGAAIVYFSYIGYDSASTMAEEVTDPFKSLPIGIVGSVLITTLLYCLMALSLCMMVPYNKISEKASFSIAFLKIGWNWASNLVGAGASLGIVASLLVAMLGQARYLCVIGRARLVPSWLAKVHPSTGTPLNATVFLGLCTATITLFTELDIIIELISIGTLLVFYMVANALIYRRYVITSHAPPTHTLVFLFLLSLSALCFSLAWKFKQQWWVLLLFGGFMIAITAFFQHVVLTTTTTIHWSVPFMPWPPAMSIFLNVFLMTTLKILSFQRFAIWACLITIFYVLYGVHNTYEAEETENEVDSSVNNLHTKVEIIQVH 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01362 573 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 14 558 - -
Gma17g01362 573 PANTHER CATIONIC AMINO ACID TRANSPORTER 7, CHLOROPLASTIC-LIKE 14 558 - -
Gma17g01362 573 Pfam C-terminus of AA_permease 496 545 IPR029485 -
Gma17g01362 573 PIRSF AA_transporter 34 490 - -
Gma17g01362 573 PIRSF AA_transporter 441 563 - -
Gma17g01362 573 Pfam Amino acid permease 57 466 IPR002293 GO:0016020|GO:0022857|GO:0055085
Gma17g01362 573 Gene3D Amino acid/polyamine transporter I 52 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01362 Gma-Chr17 12516211 12521446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01362 144 572 Organic Solute Cotransporters AT5G04770 51.364 7.18e-142 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01362 - - gmx:100782180 1107.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01362 17 12516211 12521446 Gma05g00622 05 6670710 6675484 GST
Gma11g00346 11 2783127 2785388 Gma17g01362 17 12516211 12521446 PCT
Gma17g01362 17 12516211 12521446 Gma11g00346 11 2783127 2785388 PCT