Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00346 atggatcaatactcaacctcagcagaggagcgagatactgtttgttgcttcttagttttccatgaaattgaagaacatccaagtagaacaaaccatccgataagggacctacgagttaaaagacatttagtccaatcagagtcacaccaatcagatagttgcaggtcacaatccttacataacaaaacactctgtcctatattccctttcagaggaGTTGTGAATGGAGCTGCCACAGTCTACTTTAGCTATATAGGCTATGACTCGGCTTCAACCTTGGCAGAGGAGATCAAAGATCCTTTTAAGAGCCTGCCTATTGGAATTATGGGTTCAATTCTCATAACCACCATACTTTATTGCTTAATGGCTCTATCTTTGGGTATGATGGCTCCTTACAACAAGTTAAGTAATAAAGCAACATTTTCAATCGCTTTTGCTAAGATTGGATGGATTTTGGGCATAGTTGCTTCTCTCTTAGTTGTGATGTTAGGCCAAGCTAGATACCTTTGTGTTATAGCAAGGGCCAGACTAGTGCTGTCTTGGTTTAATTATTCTTCTGGAGTTTGCACAGCATCCATTGCTCTATTCACTGAGCTTGGCATCATAATCGAGTTGGTCAACATCCGCACGCTCTTGGTGTTCTACTTGGTAGCCAATGCTCTGATATACCGTCGATATGTGATCACTAGCCACACCCCACCTATTCACACTCTCTTGTTCCAATTTCTCTTTTCACTTGGTGCTCTAGGCTTCTCCCTTTCATGGAAATTCAATCAGCAACAGTGGGGTCTCCCACTCTTTGGTGGGCTCATGATCACCATCACAGCTTTTTACCACCACAAGGTGCCTCATCATACCCATGCTGATGATGCTGATTGGTGTGTGCCATTCATGCCCTGGCCACCTGCCCTCTCCATCTTTCTCAACGTTTTCCTCATCACCACTCTAAAGCTCCTCTCTTTCCAAAGGTTTGCTATGTGGGCATGTTTCATTACCCTCTTCTATGTCCTCTATGGTGTTCACTCCACTTACCAAGCAGAAGAAGAAACTGAAATAGGGTCTAATCAACTGAATTCAAGCTCATCCAACCTACAAACTAAGGTAGAAGTTCAAGTGCTATAG 1122 0.352 MDQYSTSAEERDTVCCFLVFHEIEEHPSRTNHPIRDLRVKRHLVQSESHQSDSCRSQSLHNKTLCPIFPFRGVVNGAATVYFSYIGYDSASTLAEEIKDPFKSLPIGIMGSILITTILYCLMALSLGMMAPYNKLSNKATFSIAFAKIGWILGIVASLLVVMLGQARYLCVIARARLVLSWFNYSSGVCTASIALFTELGIIIELVNIRTLLVFYLVANALIYRRYVITSHTPPIHTLLFQFLFSLGALGFSLSWKFNQQQWGLPLFGGLMITITAFYHHKVPHHTHADDADWCVPFMPWPPALSIFLNVFLITTLKLLSFQRFAMWACFITLFYVLYGVHSTYQAEEETEIGSNQLNSSSSNLQTKVEVQVL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00346 373 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 62 353 - -
Gma11g00346 373 PANTHER CATIONIC AMINO ACID TRANSPORTER 7, CHLOROPLASTIC-LIKE 62 353 - -
Gma11g00346 373 Pfam C-terminus of AA_permease 293 342 IPR029485 -
Gma11g00346 373 Pfam Amino acid permease 69 151 IPR004841 GO:0016020|GO:0055085
Gma11g00346 373 Gene3D Amino acid/polyamine transporter I 42 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00346 Gma-Chr11 2783127 2785388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00346 68 353 Organic Solute Cotransporters AT5G04770 45.455 1.09e-79 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00346 - - gmx:100790787 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00346 11 2783127 2785388 Gma17g01362 17 12516211 12521446 PCT
Gma11g00346 11 2783127 2785388 Gma05g00622 05 6670710 6675484 PCT
Gma17g01362 17 12516211 12521446 Gma11g00346 11 2783127 2785388 PCT
Gma05g00622 05 6670710 6675484 Gma11g00346 11 2783127 2785388 PCT