Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00622 ATGTCTAACATCCACACTGCAACCAACAGCATGAAAAAGTTATCAAGTTATTTGCATTCCCTATCCCAAACCCCTCACAGGCTCAGAAAGAGAATGCTAGCCACTTGGACCCCAGACCAGGAATTCAACCAAGTGAGGCACAGATCTGGTGCTGACATGAAGAGGAAGCTCAAGTGGCATGATCTTGTGGCTCTTGGTGTTGGAGGAATGCTTGGTGTTGGAGTCTTTGTCACTACTGGCTCTGTTGCCCTTCACCACTCTGGTCCCTCAGTCTTCATTTCCTACATCATAGCAGGAATTTCAGCCCTTCTTTCCTCTTTGTGTTACACTGAATTTGCTGTTCAAGTTCCAGTTGCAGGAGGAGCTTTCAGTTATTTAAGATTAACCTTTGGGGAATTCTTGGGATATTTTGCTGGGGCAAATATACTAATGGAGTATGTGTTCTCAAACGCTGCCGTGGCAAGGAGCTTTACAGAATATTTGAGCATTGCATTTGGAGAAAATGATCCAAATGTGTGGAGGGTGGAAGTCCCTGGCTTGCCAAAGGATTATAGCATGTTGGATTTTCCAGCTGTGGCTCTCATTCTTATTCTCACTCTCTTCTTGTGTCATAGTACAAAGGAAAGCTCCATGTTAAACCTCATTATGACAGCCTTCCATGTTATTTTCTTCGGATTCATCATAATCGCTGGTTATTGCAATGGAAGTGCCAAAAACTTGGTTTCTCCAAAAGGACTAGCTCCTTTTGGTGCTAGAGGTGTTCTTGATGGAGCAGCAATAGTCTACTTCAGTTATATAGGCTATGACTCAGCTTCAACCATGGCTGAGGAGGTTAAAGACCCTTTTAAGAGCCTACCCATTGGAATCGTGGGTTCAGTTCTCATAACCACTTTGCTTTATTGCCTAATGGCTCTGTCTTTGTGCATGATGGTTCCTTACAACAAGATATCAGAGAAAGCATCATTTTCAATAGCTTTTCTGAAAATTGGTTGGAATTGGGCAAGCAACCTTGTTGGGGCAGGTGCAAGTTTGGGAATAGTGGCTTCTCTCTTGGTTGCCATGTTAGGCCAAGCAAGATACCTTTGTGTTATAGGAAGGGCACGACTTGTGCCATCATGGTTAGCCAAAGTGCATCCTTCAACAGGCACACCAATGAATGCCACGGTCTTTTTGGGGCTTTGCACAGCAACAATTGCGCTGTTCACCGAGCTTGACATTATAATTGAGTTGATCAGCATCGGCACACTGTTGGTGTTCTACATGGTAGCCAACGCTCTTATATATCGTCGATATGTAATCACTAGCCATGCCCCACCTACGCACACTCTCGTCTTCCTCTTTCTCCTTTCCCTAAGTGCACTATGCTTCTCCCTTGCGTGGAAATTCAAGCAGCAATGGTGGGGTCTCGTACTTTTTGGTGGGTTTATGATCGCCATCACCGCCTTCTTTCAACACGTGGTATCTACTACTACTACTACTACTACGACTAATTGGTCTGTGCCATTCATGCCATGGCCACCCGCCATGTCCATCTTCCTTAACGTTTTCCTCATGACAACCCTCAAGATCCTCTCTTTCCAACGATTTGCCATATGGGCATGTCTCATTACTATCTTCTATGTGCTCTATGGCGTCCACAACACTTATGAGGCTGAGGAGATTGAGAATGAAGTGGATTCAAGTGTAAACAACTTGCAAACCAAGGTAGAAATCATTCAAGTGCACTAA 1728 0.4439 MSNIHTATNSMKKLSSYLHSLSQTPHRLRKRMLATWTPDQEFNQVRHRSGADMKRKLKWHDLVALGVGGMLGVGVFVTTGSVALHHSGPSVFISYIIAGISALLSSLCYTEFAVQVPVAGGAFSYLRLTFGEFLGYFAGANILMEYVFSNAAVARSFTEYLSIAFGENDPNVWRVEVPGLPKDYSMLDFPAVALILILTLFLCHSTKESSMLNLIMTAFHVIFFGFIIIAGYCNGSAKNLVSPKGLAPFGARGVLDGAAIVYFSYIGYDSASTMAEEVKDPFKSLPIGIVGSVLITTLLYCLMALSLCMMVPYNKISEKASFSIAFLKIGWNWASNLVGAGASLGIVASLLVAMLGQARYLCVIGRARLVPSWLAKVHPSTGTPMNATVFLGLCTATIALFTELDIIIELISIGTLLVFYMVANALIYRRYVITSHAPPTHTLVFLFLLSLSALCFSLAWKFKQQWWGLVLFGGFMIAITAFFQHVVSTTTTTTTTNWSVPFMPWPPAMSIFLNVFLMTTLKILSFQRFAIWACLITIFYVLYGVHNTYEAEEIENEVDSSVNNLQTKVEIIQVH 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00622 575 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 14 560 - -
Gma05g00622 575 PANTHER CATIONIC AMINO ACID TRANSPORTER 7, CHLOROPLASTIC-LIKE 14 560 - -
Gma05g00622 575 PIRSF AA_transporter 442 567 - -
Gma05g00622 575 PIRSF AA_transporter 34 491 - -
Gma05g00622 575 Gene3D Amino acid/polyamine transporter I 52 497 - -
Gma05g00622 575 Pfam Amino acid permease 57 483 IPR002293 GO:0016020|GO:0022857|GO:0055085
Gma05g00622 575 Pfam C-terminus of AA_permease 498 547 IPR029485 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00622 Gma-Chr5 6670710 6675484 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00622 144 574 Organic Solute Cotransporters AT5G04770 51.131 2.46e-140 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00622 - - gmx:100790787 1108.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01362 17 12516211 12521446 Gma05g00622 05 6670710 6675484 GST
Gma11g00346 11 2783127 2785388 Gma05g00622 05 6670710 6675484 PCT
Gma05g00622 05 6670710 6675484 Gma11g00346 11 2783127 2785388 PCT