Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01302 ATGGCTTCCACAACTATGTTGTTGCTGGTCGTGTTCATGATTCTATGTATATCACACCCCTCATTTCAAATGGTTCTTGTGCCTTTAACACACACACTTTCCAAAGCCCAATTCAACAGCACCCACCACCTTCTCAAATCCACTTCCACCCGTTCCGCAAAACGCTTCCGCCGCCAACTCTCCCTCCCACTCTCCCCGGGCAGCGACTACACTCTCTCCTTCAACCTGGGCCCGCAGGCCCAGGCCCAGCCCATTACGCTCTACATGGACACTGGCAGCGACTTAGTCTGGTTCCCCTGCGCCCCTTTTAAATGCATACTCTGCGAGGGAAAGCCCAACGAGCCCAACGCCTCTCCCCCAACCAACATCACTCAAAGCGTCGCCGTTTCGTGCAAGTCCCCCGCGTGCTCCGCAGCGCACAACTTAGCCCCTCCCTCCGATCTCTGCGCCGCCGCTCGTTGTCCTCTCGAATCAATCGAAACCTCCGATTGCGCAAATTTCAAGTGTCCACCGTTTTATTATGCTTACGGTGATGGAAGCTTAATCGCGCGTCTCTATCGTGACACGCTTTCTCTCTCTTCTTTGTTTCTCAGAAATTTCACGTTCGGTTGCGCTCACACTACCCTCGCCGAACCTACTGGAGTCGCCGGATTCGGTCGTGGTTTGCTCTCTCTCCCGGCGCAGCTGGCCACGTTATCTCCTCAACTCGGAAACCGGTTTTCGTATTGTTTGGTTTCTCACTCGTTCGATTCGGAGCGAGTGAGAAAACCGAGTCCACTAATTCTTGGACGCTACGAGGAGAAGGAGAAGGAGAAGATTGGTGGTGGAGTGGCGGAGTTTGTTTACACGTCTATGCTTGAAAACCCTAAGCATCCTTATTTTTATACCGTTAGCTTAATCGGAATCGCCGTCGGGAAAAGGACTATTCCGGCGCCGGAGATGCTACGGCGGGTGAACAATCGAGGTGACGGCGGCGTGGTTGTGGATTCCGGCACGACGTTCACGATGTTGCCGGCGGGGTTTTATAACTCGGTGGTGGACGAGTTTGACCGCCGAGTCGGGCGAGACAACAAGCGCGCGCGTAAGATTGAAGAGAAAACGGGACTCGCGCCGTGCTATTATTTGAACTCCGTGGCGGACGTACCAGCTCTGACGCTGCGTTTTGCTGGGGGAAAGAATTCGAGTGTGGTGCTTCCTAGGAAGAACTATTTCTACGAGTTTTCGGACGGTAGTGATGGAGCGAAGGGGAAGAGGAAGGTGGGGTGCTTGATGCTGATGAACGGTGGGGATGAAGCGGATTTGAGTGGTGGGCCCGGGGCCACACTCGGGAATTACCAACAGCAAGGGTTTGAGGTTGAGTATGACTTGGAAGAGAAGCGCGTGGGGTTCGCTAGGAGGCAGTGCGCGTTGCTTTGGGAGAGACTCAATCGCGACAAAAACTAG 1443 0.5412 MASTTMLLLVVFMILCISHPSFQMVLVPLTHTLSKAQFNSTHHLLKSTSTRSAKRFRRQLSLPLSPGSDYTLSFNLGPQAQAQPITLYMDTGSDLVWFPCAPFKCILCEGKPNEPNASPPTNITQSVAVSCKSPACSAAHNLAPPSDLCAAARCPLESIETSDCANFKCPPFYYAYGDGSLIARLYRDTLSLSSLFLRNFTFGCAHTTLAEPTGVAGFGRGLLSLPAQLATLSPQLGNRFSYCLVSHSFDSERVRKPSPLILGRYEEKEKEKIGGGVAEFVYTSMLENPKHPYFYTVSLIGIAVGKRTIPAPEMLRRVNNRGDGGVVVDSGTTFTMLPAGFYNSVVDEFDRRVGRDNKRARKIEEKTGLAPCYYLNSVADVPALTLRFAGGKNSSVVLPRKNYFYEFSDGSDGAKGKRKVGCLMLMNGGDEADLSGGPGATLGNYQQQGFEVEYDLEEKRVGFARRQCALLWERLNRDKN 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01302 480 ProSiteProfiles Peptidase family A1 domain profile. 70 464 IPR033121 -
Gma17g01302 480 SUPERFAMILY Acid proteases 66 473 IPR021109 -
Gma17g01302 480 Gene3D Acid Proteases 277 470 IPR021109 -
Gma17g01302 480 Pfam Xylanase inhibitor N-terminal 70 263 IPR032861 -
Gma17g01302 480 Gene3D Acid Proteases 60 263 IPR021109 -
Gma17g01302 480 Pfam Xylanase inhibitor C-terminal 295 464 IPR032799 -
Gma17g01302 480 PANTHER BNAA01G17170D PROTEIN 1 473 - -
Gma17g01302 480 PANTHER OS07G0603500 PROTEIN-RELATED 1 473 - -
Gma17g01302 480 CDD pepsin_A_like_plant 70 468 IPR034161 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01302 Gma-Chr17 11690053 11692169 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01302 - - gmx:100805699 951.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01302 17 11690053 11692169 Gma17g01302 17 11690053 11692169 ECH
Gma17g01302 17 11690053 11692169 Gma05g00557 05 5510638 5512005 GST
Gma11g00295 11 2376760 2378575 Gma17g01302 17 11690053 11692169 PCT