Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00295 ATGGCTCTTCCCCTGTTCCTCCTCTGCTTCATGCTCTGCATTTCACTCACACACCAAACGATTATGTTACCCCTAACACACTCAATTTCGAAAACCCATTTCAACAGTACCCACCAGCTTCTCAAATCTACCTCCACTCGCTCAGCCTCACGCTTCCACCGCCAAACTCATCATAACTCCGTAGTCTCTCTCCCACTTTCTTCAGGAAGCGACTACACCCTTTCCTTCAACTTAGGCTCACACCCTTCTCAATCCATAACCCTTTACATGGACACAGGCAGCGACCTCGTGTGGTTCCCATGCGCTCCCTTCGAATGCATTCTCTGCGAAGGCAAATTCAACGCCACGAAGCCTCTTAACATCACGCGCTCCCACCGCGTCTCGTGCCAGTCCCCTGCATGTTCCACAGCACACTCCTCCGTCTCCTCCCACGACCTCTGCGCAATCGCACGTTGTCCTTTGGACAACATTGAAACCTCCGATTGCTCTTCTGCCACGTGTCCTCCCTTCTACTATGCTTACGGCGACGGAAGCTTCATCGCGCACCTCCACCGCGATACACTCTCCATGTCTCAGCTTTTTCTTAAGAACTTCACCTTCGGCTGCGCCCACACTGCGCTCGCCGAACCCACCGGCGTCGCAGGTTTCGGTCGGGGATTACTGTCCCTCCCTGCGCAACTTGCGACCTTATCTCCGAACCTCGGTAACCGTTTCTCTTATTGCTTGGTCTCTCACTCTTTCGACAAAGAACGAGTTCGCAAACCGAGTCCACTCATTCTCGGCCACTACGATGATTATTCCAGCGAGCGTGTTGAGTTTGTTTACACCTCCATGCTTCGGAATCCGAAGCATTCTTATTTCTACTGCGTCGGACTCACCGGAATCTCTGTAGGGAAGAGGACTATTCTGGCCCCGGAAATGCTACGGAGGGTGGACCGCAGAGGGGACGGAGGCGTGGTTGTTGACAGCGGAACCACTTTCACGATGCTGCCGGCGAGTTTGTATAACTCGGTTGTTGCTGAGTTCGACCGGCGAGTCGGGCGAGTTCACAAGCGCGCGAGTGAGGTGGAGGAAAAAACTGGCCTCGGGCCGTGTTATTTTTTGGAGGGGTTGGTGGAGGTGCCCACGGTGACGTGGCATTTTCTGGGGAATAATTCCAATGTGATGCTGCCTAGGATGAATTATTTTTACGAGTTCTTGGACGGTGAGGATGAGGCTAGGAGGAAGGTGGGCTGTCTGATGCTAATGAACGGTGGTGATGACACTGAACTGAGCGGTGGGCCCGGGGCCATACTTGGGAACTATCAACAGCAAGGATTTGAGGTCGTGTATGACTTGGAAAACCAGCGCGTGGGTTTTGCTAAGAGGCAATGCGCGTCGCTTTGGGATAGTCTCAACCGTGACAAAAACTAG 1413 0.5322 MALPLFLLCFMLCISLTHQTIMLPLTHSISKTHFNSTHQLLKSTSTRSASRFHRQTHHNSVVSLPLSSGSDYTLSFNLGSHPSQSITLYMDTGSDLVWFPCAPFECILCEGKFNATKPLNITRSHRVSCQSPACSTAHSSVSSHDLCAIARCPLDNIETSDCSSATCPPFYYAYGDGSFIAHLHRDTLSMSQLFLKNFTFGCAHTALAEPTGVAGFGRGLLSLPAQLATLSPNLGNRFSYCLVSHSFDKERVRKPSPLILGHYDDYSSERVEFVYTSMLRNPKHSYFYCVGLTGISVGKRTILAPEMLRRVDRRGDGGVVVDSGTTFTMLPASLYNSVVAEFDRRVGRVHKRASEVEEKTGLGPCYFLEGLVEVPTVTWHFLGNNSNVMLPRMNYFYEFLDGEDEARRKVGCLMLMNGGDDTELSGGPGAILGNYQQQGFEVVYDLENQRVGFAKRQCASLWDSLNRDKN 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00295 470 CDD pepsin_A_like_plant 72 458 IPR034161 -
Gma11g00295 470 Pfam Xylanase inhibitor C-terminal 288 454 IPR032799 -
Gma11g00295 470 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 319 330 IPR001969 GO:0004190|GO:0006508
Gma11g00295 470 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 2 467 - -
Gma11g00295 470 Gene3D Acid Proteases 55 261 IPR021109 -
Gma11g00295 470 Gene3D Acid Proteases 262 464 IPR021109 -
Gma11g00295 470 Pfam Xylanase inhibitor N-terminal 72 261 IPR032861 -
Gma11g00295 470 PANTHER ASPARTYL PROTEASES 2 467 IPR001461 GO:0004190|GO:0006508
Gma11g00295 470 ProSiteProfiles Peptidase family A1 domain profile. 72 454 IPR033121 -
Gma11g00295 470 SUPERFAMILY Acid proteases 67 463 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00295 Gma-Chr11 2376760 2378575 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00295 - - gmx:100807884 947.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00295 11 2376760 2378575 Gma11g00295 11 2376760 2378575 ECH
Gma11g00295 11 2376760 2378575 Gma17g01302 17 11690053 11692169 PCT
Gma11g00295 11 2376760 2378575 Gma05g00557 05 5510638 5512005 PCT