Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00557 ATGGTACTCTTGcctctaacacacactctttcccaaacccaattcaacagcacccaccacctcctcaaatctacctcaacCCTTTCCGCCAAACGGTTCCGCCGCCAACTCTCCCTCCCACTCTCCCCGGGCAGCGACTACACTCTCTCCTTCAACCTGGGCCCACGGGCCCAAGCCCAGCCCATAACACTCTACATGGACACCGGCAGCGACTTAGTCTGGTTCCCCTGCGCCCCTTTTAAATGCATTCTCTGCGAGGGAAAGCCCAATGCCTCTCCCCCCGTCAACACCACCCGAAGCGTCGCCGTTTCATGCAAGTCCCCGGCATGCTCCGCAGCGCACAACTTAGCCTCTCCCTCCGATCTCTGCGCCGCCGCTCGTTGCCCTCTCGAATCAATCGAAACCTCCGATTGCGCAAATTTCAAGTGTCCACCGTTTTACTACGCATACGGTGATGGAAGCTTAATCGCGCGTCTCTATCGTGACACGCTTTCTCTCTCTTCTTTGTTTCTCAGAAATTTCACGTTCGGTTGCGCTTACACTACCCTCGCCGAACCAACCGGAGTCGCCGGATTCGGTCGCGGTTTGCTCTCTCTCCCGGCGCAGCTGGCCACGCTATCTCCTCAACTCGGAAACCGGTTTTCGTATTGTTTGGTTTCTCACTCGTTCGACTCGGAGCGAGTGAGAAAACCGAGTCCACTCATTCTCGGACGTTACGAGGAGGAGGAGGAGGAGGAGGAGAAGGTTGGTGGTGGAGTGGCGGAGTTTGTGTACACGCCTATGCTTGAAAACCCTAAGCATCCTTATTTTTATACCGTTGGCTTAATCGGAATCTCCGTCGGGAAAAGGATTGTTCCGGCGCCGGAGATGCTGCGGCGGGTGAACAATCGAGGCGACGGCGGCGTGGTTGTGGATTCCGGCACGACGTTCACGATGTTGCCGGCGGGGTTTTATAACTCGGTGGTTGACGAGTTTGACCGCGGAGTCGGGCGAGTCAACGAGCGCGCGCGTAAGATTGAAGAAAAAACGGGACTCGCGCCGTGTTATTATTTGAACTCCGTGGCGGAGGTGCCGGTTCTAACGCTGCGTTTTGCTGGGGGGAATTCGAGTGTGGTGCTGCCTAGGAAGAACTATTTCTACGAGTTTTTGGACGATAGGGATGCAGCGAAGGGAAAGAGGAGGGTGGGGTGTTTGATGCTGATGAACGGTGGAGATGAGGCGGAGCTGAGCGGTGGGCCCGGGGCCACACTCGGGAATTACCAGCAGCAGGGGTTTGAGGTTGAGTATGACCTGGAAGAGAAGCGCGTGGGGTTCGCTAGAAGGCAGTGCGCGTCGCTTTGGGAGAGACTCAATCGCGACAAAAACTAG 1368 0.5373 MVLLPLTHTLSQTQFNSTHHLLKSTSTLSAKRFRRQLSLPLSPGSDYTLSFNLGPRAQAQPITLYMDTGSDLVWFPCAPFKCILCEGKPNASPPVNTTRSVAVSCKSPACSAAHNLASPSDLCAAARCPLESIETSDCANFKCPPFYYAYGDGSLIARLYRDTLSLSSLFLRNFTFGCAYTTLAEPTGVAGFGRGLLSLPAQLATLSPQLGNRFSYCLVSHSFDSERVRKPSPLILGRYEEEEEEEEKVGGGVAEFVYTPMLENPKHPYFYTVGLIGISVGKRIVPAPEMLRRVNNRGDGGVVVDSGTTFTMLPAGFYNSVVDEFDRGVGRVNERARKIEEKTGLAPCYYLNSVAEVPVLTLRFAGGNSSVVLPRKNYFYEFLDDRDAAKGKRRVGCLMLMNGGDEAELSGGPGATLGNYQQQGFEVEYDLEEKRVGFARRQCASLWERLNRDKN 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00557 455 PANTHER BNAA01G17170D PROTEIN 2 448 - -
Gma05g00557 455 Pfam Xylanase inhibitor C-terminal 271 439 IPR032799 -
Gma05g00557 455 Gene3D Acid Proteases 37 237 IPR021109 -
Gma05g00557 455 Pfam Xylanase inhibitor N-terminal 47 237 IPR032861 -
Gma05g00557 455 PANTHER OS07G0603500 PROTEIN-RELATED 2 448 - -
Gma05g00557 455 CDD pepsin_A_like_plant 47 443 IPR034161 -
Gma05g00557 455 Gene3D Acid Proteases 249 448 IPR021109 -
Gma05g00557 455 ProSiteProfiles Peptidase family A1 domain profile. 47 439 IPR033121 -
Gma05g00557 455 SUPERFAMILY Acid proteases 43 448 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00557 Gma-Chr5 5510638 5512005 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00557 - - gmx:100805699 824.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00557 05 5510638 5512005 Gma05g00557 05 5510638 5512005 ECH
Gma17g01302 17 11690053 11692169 Gma05g00557 05 5510638 5512005 GST
Gma11g00295 11 2376760 2378575 Gma05g00557 05 5510638 5512005 PCT