Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01297 ATGGCAAAGAGTTACTTCAAACAAGAGCATGATCTTGAGAAGAGAAGAGCTGAGGCTGCTAGGATTAGAGAGAAATACCCAGACCGTATCCCGGTGATTGTGGAGAAGGCAGAAAGAAGTGATATCCCAAGTATTGACAAGAAGAAGTACCTTGTCCCTGCTGATCTGACAGTTGGACAGTTTGTCTATGTTATCCGCAAAAGGATTAAATTAAGTGCAGAAAAGGCAATCTTTATCTTTGTGGACAACGTCCTTCCACCTACAGGAGCAATTATGTCTTCCATATATGATGAGAAGAAGGATGAAGATGGGTTTCTTTATGTTACTTACAGTGGAGAGAACACTTTTGGGGATCTGACTTCCCATTAG 369 0.4146 MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSSIYDEKKDEDGFLYVTYSGENTFGDLTSH 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01297 122 PANTHER AUTOPHAGY-RELATED PROTEIN 1 117 - -
Gma17g01297 122 Pfam Autophagy protein Atg8 ubiquitin like 14 117 IPR004241 -
Gma17g01297 122 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 1 117 IPR004241 -
Gma17g01297 122 CDD Ubl_ATG8 12 114 - -
Gma17g01297 122 Gene3D - 1 117 - -
Gma17g01297 122 SUPERFAMILY Ubiquitin-like 3 117 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01297 Gma-Chr17 11645859 11649642 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01297 K08341 - gmx:100499835 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01297 17 11645859 11649642 Gma17g01297 17 11645859 11649642 ECH
Gma17g01297 17 11645859 11649642 Gma05g00551 05 5440411 5447126 GST
Gma01g02115 01 56485228 56496694 Gma17g01297 17 11645859 11649642 PCT
Gma11g00293 11 2358925 2362415 Gma17g01297 17 11645859 11649642 PCT