Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00551 ATGCTGCCATTCCTAAGTAGAGGTGGTGCACTGATGCCTCCTCTTGTTTGCTGGTTACTAGATGCATTACTTTCTTCGCTAATCTATGCTCCTTTGAACGGCAACAAATTGTCACTAATTTCTTCCTGCATTGCAACTGCAACTGCAACTGCATTTTACAGTAATGTAGCCAGTCTCAGTGAGAGATTGTCTGCAATCAGAGGAAGAATGACAAAGAGTTACTTCAAACAAGAGCATGATCTTGAGAAGAGAAGAGCCGAGGCTGCTAGGATTAGGGAGAAATACCCAGACCGTATCCCGGTGATTGTGGAGAAGGCAGAAAGAAGTGATATCCCAAGTATTGACAAGAAGAAGTACCTTGTCCCTGCTGATCTGACAGTTGGACAGTTCGTCTATGTTATCCGCAAAAGGATTAAATTAAGCGCAGAAAAGGCAATCTTTATCTTTGTGGACAACGTCCTTCCACCGACAGGAGCAATTATGTCTGCCATATATGATGAGAAGAAGGATGAGGATGGGTTTCTTTATGTTACTTACAGTGGAGAGAACACCTTTGGGGATCTGACTTCCCACTAG 576 0.434 MLPFLSRGGALMPPLVCWLLDALLSSLIYAPLNGNKLSLISSCIATATATAFYSNVASLSERLSAIRGRMTKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYDEKKDEDGFLYVTYSGENTFGDLTSH 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00551 191 CDD Ubl_ATG8 81 183 - -
Gma05g00551 191 PANTHER AUTOPHAGY-RELATED PROTEIN 59 186 - -
Gma05g00551 191 SUPERFAMILY Ubiquitin-like 72 186 IPR029071 -
Gma05g00551 191 Pfam Autophagy protein Atg8 ubiquitin like 83 186 IPR004241 -
Gma05g00551 191 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 59 186 IPR004241 -
Gma05g00551 191 Gene3D - 59 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00551 Gma-Chr5 5440411 5447126 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00551 K08341 - gmx:100818620 235.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00551 05 5440411 5447126 Gma05g00551 05 5440411 5447126 ECH
Gma17g01297 17 11645859 11649642 Gma05g00551 05 5440411 5447126 GST
Gma01g02115 01 56485228 56496694 Gma05g00551 05 5440411 5447126 PCT
Gma11g00293 11 2358925 2362415 Gma05g00551 05 5440411 5447126 PCT