Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01293 ATGAAGACTCTCCCTCAAACACCAGGGAAAACCATCCCAGATGCTTGCGACTACAAAGGTCACCCAGCAGAGAGGTCCAAAACCGGTGGTTGGACTGCTGCGGCCATGATTTTAGGAGTGGAAGCATGTGAGAGGTTAACGACAATGGGTGTTGCCGTGAATTTGGTGACATATTTGACGGGTACGATGCATTTGGGCAGTGCTAATTCTGCCAACACGGTCACCAACTTCATGGGAACCTCTTTCATGCTCTGTTTGTTCGGTGGTTTTGTAGCTGACACTTTTATCGGCAGATACCTCACTATTGCCATCTTCGCGACTGTTCAAGCCACTGGTGTGACAATATTAACAATATCAACCATAATCCCAAGCCTGCACCCTCCAAAATGCATAAGAGACGCGACCAGACGCTGCATGCCAGCAAACAACATGCAGCTGATGGTTCTCTACATAGCTTTATACACGACGTCCCTCGGCATTGGAGGCTTGAAATCCAGCGTCTCAGGCTTCGGCACGGACCAGTTCGACGAGTCGGACAAGGGAGAGAAGAAGCAGATGCTGAAATTCTTCAACTGGTTCGTGTTCTTCATAAGCTTGGGGACACTAACTGCAGTGACGGTTCTCGTGTACATTCAGGATCATATAGGGAGGTACTGGGGCTACGGGATAAGTGTGTGTGCTATGCTGGTGGCTCTTCTGGTGTTGTTGTCGGGCACCAGGAGGTACCGCTACAAGAGACTGGTGGGAAGTCCCTTGGCGCAGATCGCGATGGTGTTTGTGGCGGCTTGGAGGAAGAGGCACTTGGAATTTCCCTCTGATTCTTCATTGTTGTTCAACTTGGATGATGTGGCTGATGAAACTCTCAGGAAGAACAAGCAGATGTTGCCCCATAGCAAGCAGTTCCGCTTCTTGGACAAGGCAGCGATCAAGGACCCAAAAACGGACGGCGAAGAAATCACGATGGAGAGGAAGTGGTACCTCTCAACCCTAACCGACGTGGAAGAGGTCAAAATGGTGCAAAGAATGCTCCCCGTGTGGGCCACCACCATCATGTTCTGGACAGTCTACGCCCAAATGACCACATTCTCAGTCCAACAAGCCACCACCATGGACCGCCGCATAATCGGAAACTCCTTCCAAATCCCCGCCGCGTCGCTCACCGTCTTCTTCGTCGGAAGCGTCCTCCTAACGGTCCCCGTCTACGACCGCGTCATCACCCCCATAGCTAAGAAACTCTCACACAACCCACAAGGGCTCACCCCTTTGCAACGCATTGGGGTAGGGTTAGTGTTCTCAATCTTAGCCATGGTGTCAGCAGCACTTATCGAAATAAAACGCCTAAGAATGGCACGTGCGAACGGTTTGGCGCACAAACACAATGCAGTGGTTCCCATAAGCGTGTTCTGGCTTGTCCCACAGTTCTTCTTTGTGGGGTCGGGGGAGGCATTTACGTACATAGGGCAACTAGATTTTTTCCTGAGGGAATGTCCCAAAGGGATGAAGACCATGAGCACGGGCTTGTTCCTCAGCACGTTGTCGTTAGGGTTTTTTCTTAGCTCACTGTTGGTGACTTTGGTGCACAAAGCCACGCGCCACCGCGAACCGTGGCTCGCGGATAATCTTAACCATGGGAAACTACATTACTTCTACTGGCTATTGGCTTTGTTGAGTGGTGTGAATTTGGTGGCGTACTTGTTTTGTGCTAAGGGGTATGTGTACAAGGACAAGAGGCTCGCTGAGGCAGGCATTGAGTTGGAGGAAACAGACACTGCTTCCCATGCTTAG 1785 0.5092 MKTLPQTPGKTIPDACDYKGHPAERSKTGGWTAAAMILGVEACERLTTMGVAVNLVTYLTGTMHLGSANSANTVTNFMGTSFMLCLFGGFVADTFIGRYLTIAIFATVQATGVTILTISTIIPSLHPPKCIRDATRRCMPANNMQLMVLYIALYTTSLGIGGLKSSVSGFGTDQFDESDKGEKKQMLKFFNWFVFFISLGTLTAVTVLVYIQDHIGRYWGYGISVCAMLVALLVLLSGTRRYRYKRLVGSPLAQIAMVFVAAWRKRHLEFPSDSSLLFNLDDVADETLRKNKQMLPHSKQFRFLDKAAIKDPKTDGEEITMERKWYLSTLTDVEEVKMVQRMLPVWATTIMFWTVYAQMTTFSVQQATTMDRRIIGNSFQIPAASLTVFFVGSVLLTVPVYDRVITPIAKKLSHNPQGLTPLQRIGVGLVFSILAMVSAALIEIKRLRMARANGLAHKHNAVVPISVFWLVPQFFFVGSGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFLSSLLVTLVHKATRHREPWLADNLNHGKLHYFYWLLALLSGVNLVAYLFCAKGYVYKDKRLAEAGIELEETDTASHA 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01293 594 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 88 112 IPR018456 GO:0006857|GO:0016020|GO:0022857
Gma17g01293 594 PANTHER PROTEIN NRT1/ PTR FAMILY 6.3-LIKE 10 586 - -
Gma17g01293 594 Pfam POT family 99 532 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gma17g01293 594 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 586 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gma17g01293 594 SUPERFAMILY MFS general substrate transporter 19 571 IPR036259 -
Gma17g01293 594 Gene3D MFS general substrate transporter like domains 6 581 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01293 Gma-Chr17 11542564 11548876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01293 3 587 Organic Solute Cotransporters AT1G12110 60.818 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01293 - - gmx:100800913 1140.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01293 17 11542564 11548876 Gma17g01293 17 11542564 11548876 ECH
Gma17g01293 17 11542564 11548876 Gma05g00544 05 5288888 5290919 GST
Gma01g02118 01 56522194 56526198 Gma17g01293 17 11542564 11548876 PCT
Gma11g00290 11 2335480 2339898 Gma17g01293 17 11542564 11548876 PCT