Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00544 ATGAACACTCTCCCTCAAACACCAGGGAAAACCATCCCAGATGCCTGCGACTACAAAGGTCGCCCAGCAGAGAGGTCCAAAACCGGAGTGGAAGCATGTGAGAGGTTAACGACAATGGGTGTTGCCGTGAATTTGGCGACATATTTGACGGGTACGATGCATTTGGGCAGTGCTAACTCTGCCAACACGGTCACCAACTTCATGGGAACCTCTTTAATGCTCTGTTTGTTCGGTGGTTTTGTAGCTGACACTTTTATCGGCAGGTTTGTGACCATTCGATCCCTTCATAGGTTTAaattgcagccacaatgtaaagatatttttttaactcattgcaattgcatcgcgacagcatttgtcgaattatATCTTTACAAAATATGTTTTCATGGTGTGACAATATTGACCATATCAACAATAATCCCAAGCCTGCACCCTCCAAAATGCATAAGAGACGCCACCAGACGCTGCATGTCAGCAAACAACATGCAGCTAATGGTGCTCTACATAGCCCTCTACACCACATCCCTCGGCATTGGAGGCTTGAAATCCAGCGTCTCAGGCTTCAGCACGGACCAGTTCGACGATTCGGACAAGGGAGAGAAGAAGCAGATGCTGAAATTCTTCAACTGGTTCGTGTTCTTCATAAGCCTGGGGACACTGACCGCGGTGACGGTTCTTGTGTACATTCAGGATCACATAGGGAGGTACTGGGGATACGGGATAAGTGTGTGTGCTATGCTGGTGGCTCTTCTGGTGTTGTTGTCGAGCACGAGGAGGTACCGCTACAAGAGACTGGTGGGAAGCCCTTTGACGCAGATTGCGATGGTGTTTGTGGCGGCTTGGAGGAAGAGGCACTTGGAATTGCCCTCTGATTCATCCTTGTTGTTCAACTTGGATGATGTGGCTGATGAAAGTCTCAGAAAGAACAAGCAGATGTTGCCTCATAGCAAGCAGTTTCGGTATGGCTTCTCACCTTGTTATACTAATTATTTAGCTGAAATTAATGATATTTCACACACACTATGA 1029 0.4431 MNTLPQTPGKTIPDACDYKGRPAERSKTGVEACERLTTMGVAVNLATYLTGTMHLGSANSANTVTNFMGTSLMLCLFGGFVADTFIGRFVTIRSLHRFKLQPQCKDIFLTHCNCIATAFVELYLYKICFHGVTILTISTIIPSLHPPKCIRDATRRCMSANNMQLMVLYIALYTTSLGIGGLKSSVSGFSTDQFDDSDKGEKKQMLKFFNWFVFFISLGTLTAVTVLVYIQDHIGRYWGYGISVCAMLVALLVLLSSTRRYRYKRLVGSPLTQIAMVFVAAWRKRHLELPSDSSLLFNLDDVADESLRKNKQMLPHSKQFRYGFSPCYTNYLAEINDISHTL 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00544 342 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 313 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gma05g00544 342 Pfam POT family 126 295 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gma05g00544 342 Gene3D MFS general substrate transporter like domains 6 322 IPR036259 -
Gma05g00544 342 PANTHER PROTEIN NRT1/ PTR FAMILY 6.3-LIKE 10 313 - -
Gma05g00544 342 SUPERFAMILY MFS general substrate transporter 165 286 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00544 Gma-Chr5 5288888 5290919 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00544 3 321 Organic Solute Cotransporters AT1G12110 52.870 4.30e-107 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00544 - - gmx:100795700 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01293 17 11542564 11548876 Gma05g00544 05 5288888 5290919 GST
Gma01g02118 01 56522194 56526198 Gma05g00544 05 5288888 5290919 PCT
Gma11g00290 11 2335480 2339898 Gma05g00544 05 5288888 5290919 PCT