Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02118 ATGAGCAGCCTCCCTACAACTCAAGGGAAACCCATCCCTGATGCCTCCGACTACAAGGGCCGCCCCGCCGAGCGGTCCAAAACTGGTGGCTGGACCGCATCCGCCATGATATTAGGAGGAGAAGTGATGGAGAGGTTGACAACACTAGGCATCGCGGTGAATTTGGTGACATATTTGACTGGGACCATGCATTTGGGTAATGCTGCCTCTGCCAACGTTGTAACCAACTTTTTGGGAACCTCCTTCATGCTCTGTCTGCTCGGTGGCTTCCTCGCCGATACTTTTCTCGGAAGATACCGCACCATCGCCATCTTCGCAGCCGTTCAAGCAACTGGTGTTACAATATTGACGATATCAACCATAATTCCGAGCCTTCACCCTCCAAAGTGCAACGGAGACACCGTGCCTCCTTGCGTGAGAGCAAATGAGAAACAGTTAACGGCACTTTATTTGGCGCTTTATGTAACGGCTCTCGGCACCGGAGGTCTGAAATCGAGTGTTTCAGGGTTCGGTTCGGACCAGTTCGATGATTCGGACAACGACGAGAAGAAGCAGATGATAAAGTTCTTCAACTGGTTCTACTTCTTCGTGAGCATAGGGTCTCTGGCCGCAACCACGGTTCTTGTGTACGTACAAGACAACATAGGACGGGGTTGGGGTTATGGTATCTGCGCGGGTGCGATTGTGGTGGCGCTTCTCGTGTTCTTGTCGGGTACGAGGAAGTACCGTTTCAAGAAACGTGTGGGAAGTCCATTAACTCAGTTTGCGGAAGTGTTCGTGGCTGCTCTGAGGAAGAGGAACATGGAATTGCCCTCTGATTCATCATTGCTCTTTAATGACTACGACCCCAAGAAGCAGACACTGCCGCATAGCAAGCAGTTCCGtttcttggacaaagctgcaatcatggattcatcagaatgCGGAGGTGGAATGAAGAGGAAGTGGTATCTTTGCAACTTAACAGACGTGGAAGAAGTGAAAATGGTACTAAGAATGCTACCCATATGGGCCACCACCATCATGTTTTGGACAATCCACGCTCAAATGACCACATTCTCGGTAGCACAAGCGACAACCATGGACCGTCACATAGGAAAAACATTTCAAATCCCCGCGGCATCAATGACCGTTTTCTTAATTGGAACCATTCTCCTAACTGTCCCCTTTTACGACCGTTTCATCGTTCCCGTGGCAAAGAAAGTGCTCAAGAACCCACATGGGTTCACCCCTTTGCAACGCATTGGAGTTGGTTTAGTACTCTCAGTGATTTCCATGGTGGTAGGAGCACTAATAGAAATAAAGAGACTAAGATATGCTCAATCGCATGGTTTGGTGGATAAGCCAGAAGCAAAGATCCCAATGACCGTGTTTTGGTTGATCCCACAAAACTTCATTGTGGGGGCAGGGGAGGCATTTATGTACATGGGGCAGTTGAACTTTTTCCTAAGAGAGTGTCCCAAAGGGATGAAAACAATGAGCACGGGATTGTTCTTGAGCACACTCTCTTTGGGGTTTTTCTTTAGCACCTTGCTAGTGTCTATAGTGAACAAAATGACAGCACATGGTAGGCCATGGCTCGCAGATAATCTTAACCAAGGGAGGCTCTATGACTTTTACTGGCTTCTGGCTATATTGAGTGCTATAAATGTGGTGTTATACTTGGTTTGTGCTAAGTGGTACGTCTACAAGGAGAAGAGGCTTGCTGATGAGGGCATTGTATTGGAAGAAACAGATGATGCTGCTTTCCATGGCCATTGA 1761 0.4719 MSSLPTTQGKPIPDASDYKGRPAERSKTGGWTASAMILGGEVMERLTTLGIAVNLVTYLTGTMHLGNAASANVVTNFLGTSFMLCLLGGFLADTFLGRYRTIAIFAAVQATGVTILTISTIIPSLHPPKCNGDTVPPCVRANEKQLTALYLALYVTALGTGGLKSSVSGFGSDQFDDSDNDEKKQMIKFFNWFYFFVSIGSLAATTVLVYVQDNIGRGWGYGICAGAIVVALLVFLSGTRKYRFKKRVGSPLTQFAEVFVAALRKRNMELPSDSSLLFNDYDPKKQTLPHSKQFRFLDKAAIMDSSECGGGMKRKWYLCNLTDVEEVKMVLRMLPIWATTIMFWTIHAQMTTFSVAQATTMDRHIGKTFQIPAASMTVFLIGTILLTVPFYDRFIVPVAKKVLKNPHGFTPLQRIGVGLVLSVISMVVGALIEIKRLRYAQSHGLVDKPEAKIPMTVFWLIPQNFIVGAGEAFMYMGQLNFFLRECPKGMKTMSTGLFLSTLSLGFFFSTLLVSIVNKMTAHGRPWLADNLNQGRLYDFYWLLAILSAINVVLYLVCAKWYVYKEKRLADEGIVLEETDDAAFHGH 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02118 586 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 88 112 IPR018456 GO:0006857|GO:0016020|GO:0022857
Gma01g02118 586 PANTHER PEPTIDE/NITRATE TRANSPORTER 10 574 - -
Gma01g02118 586 Gene3D MFS general substrate transporter like domains 6 571 IPR036259 -
Gma01g02118 586 MobiDBLite consensus disorder prediction 1 27 - -
Gma01g02118 586 SUPERFAMILY MFS general substrate transporter 19 564 IPR036259 -
Gma01g02118 586 Pfam POT family 99 521 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gma01g02118 586 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 574 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02118 Gma-Chr1 56522194 56526198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02118 3 577 Organic Solute Cotransporters AT1G12110 63.032 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02118 - - gmx:100819392 1122.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02118 01 56522194 56526198 Gma01g02118 01 56522194 56526198 ECH
Gma01g02118 01 56522194 56526198 Gma11g00290 11 2335480 2339898 GST
Gma01g02118 01 56522194 56526198 Gma17g01293 17 11542564 11548876 PCT
Gma01g02118 01 56522194 56526198 Gma05g00544 05 5288888 5290919 PCT