Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01231 AtgggcttcccagccaacggcgcctctgcggcccagcccctaaacttcctcatctacggccgcacgggctggattggcggcctcctcggctccctctgccgggcccagggcatctccttccattacggctcgggccgcctcgagaaccgggcctccctcgaaaccgacatagccctcctcaagccctcccacgtcttcaacgccgccggcgtcacgggccgccccaacgtcgactggtgcgagtcccacaaagtcgagaccatccgaaccaacgtcgtcggaaccctcactctcgccgacgtctGCCGCGACCACGGCCTCATTCTCATCAACTACGCCACCGGTTGCATTTTCGAGTACGACTCCGATCACCCCCTCGGATCCGGTATCGGCTTCAAAGAAACCGACTCTCCCAATTTCACCGGTTCTTTTTACTCCAAGACCAAGGCAATGGTAGAGGATCTGCTGAAGAACTATGATAATGTGTGCACATTGCGAGTGAGGATGCCTATCTCATCCGATTTATTGAACCCGCGCAATTTTATCACTAAGATCACTCGATATGAGAAGGTTGTGGATATTCCGAATTCGATGACTATATTGGATGAACTGCTTCCAATTTCAATTGAGATGGGGAAGAGGAATCTGACTGGGATCTGGAACTTTACTAACCCAGGAGTGGTTAGTCACAATGAAATCTTGGAGATGTACAGAGATTATGTTGACCCGAACTTCACCTGGAACAACTTCACTCTCGAGGAACAGGCCAAGGTGATTGTTGCTCCGAGGAGCAACAATGAGCTTGACGCTGCCAAATTGAAGAAGGAATTTCCAGAACTGTTGTCTATTAAGGATTCTCTTATTAAGTATGTCTTCGAGCCAAACCagaaggttaaagctcaagtctaa 909 0.2904 MGFPANGASAAQPLNFLIYGRTGWIGGLLGSLCRAQGISFHYGSGRLENRASLETDIALLKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRDHGLILINYATGCIFEYDSDHPLGSGIGFKETDSPNFTGSFYSKTKAMVEDLLKNYDNVCTLRVRMPISSDLLNPRNFITKITRYEKVVDIPNSMTILDELLPISIEMGKRNLTGIWNFTNPGVVSHNEILEMYRDYVDPNFTWNNFTLEEQAKVIVAPRSNNELDAAKLKKEFPELLSIKDSLIKYVFEPNQKVKAQV 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01231 302 CDD dTDP_HR_like_SDR_e 15 287 - -
Gma17g01231 302 Gene3D - 6 302 - -
Gma17g01231 302 Pfam RmlD substrate binding domain 16 186 IPR029903 -
Gma17g01231 302 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 8 296 - -
Gma17g01231 302 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 13 275 IPR036291 -
Gma17g01231 302 PANTHER BNAC05G13120D PROTEIN 8 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01231 Gma-Chr17 10858825 10860289 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01231 K12451 - gmx:100781643 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01231 17 10858825 10860289 Gma17g01231 17 10858825 10860289 ECH
Gma17g01231 17 10858825 10860289 Gma05g00478 05 4542826 4543455 GST
Gma17g01231 17 10858825 10860289 Gma01g02162 01 56912024 56913207 PCT