Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02162 ATGGGTGCAGAAGCAAATGGCGGCGAGAAGCAATTGaaatttctgatctacggtcgcagcggttggattggtggtctactgggtaagctctgcgaagagcgcgggatccaatatgagtacggcaccggcagattggagaaccgctcgtcgttggaggcggacatagcggctgtgaagcccagccacgtgttcaacgccgcgggtgtcacgggtagacccaatgtggactggtgcgaatctcacaaagttgaaaccatccgaaccaacgtcgtcggcactctcaccctcgccgacgtctGCCATCATAAAGGCCTCATCCTCATCAACTACGCCACCGGCTGCATCTTCGAGTACGATTCTTCCCACACTCTCGGATCCGGCATCGCCTTCAAGGAACACGACACTCCCAATTTCACCGGATCCTTCTACTCCAAGACCAAAGCCATGGTGGAGGATCTGGTTGGGAACTACGAGAACGTGTGCACGTTGCGTGTGAGGATGCCGATTTCGTCGGATTTGTCGAACCCGCGGAATTTCATCACTAAGATCACTCGATACGACAAGGTTGTCGACATTCCCAACTCCATGACCATATTGGACGAGCTTCTCCCAATCTCGCTGGAGATGGCCAAGCGGAACCTCACTGGGATCTGGAATTTCACCAACCCTGGAGTCGTAAGTCACAACGAGATTTTACAGATGTACAAGGAATACGTGGATCCGAACTTTACATGGAAGAACTTCACTCTGGAGGAGCAGGCTAAGGTGATTGTTGCCCCTAGAAGCAACAACGAGCTTGACGCCTCTAAGTTGAAGAATGAGTTTCCTCAACTTTTGTCCATCAAAGACTCCCTCGTTAAGTATGTATTCCAGCCAAATCAGAAAAAGGCATAA 894 0.3468 MGAEANGGEKQLKFLIYGRSGWIGGLLGKLCEERGIQYEYGTGRLENRSSLEADIAAVKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCHHKGLILINYATGCIFEYDSSHTLGSGIAFKEHDTPNFTGSFYSKTKAMVEDLVGNYENVCTLRVRMPISSDLSNPRNFITKITRYDKVVDIPNSMTILDELLPISLEMAKRNLTGIWNFTNPGVVSHNEILQMYKEYVDPNFTWKNFTLEEQAKVIVAPRSNNELDASKLKNEFPQLLSIKDSLVKYVFQPNQKKA 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02162 297 Pfam RmlD substrate binding domain 13 184 IPR029903 -
Gma01g02162 297 PANTHER BNAC05G13120D PROTEIN 10 294 - -
Gma01g02162 297 CDD dTDP_HR_like_SDR_e 13 285 - -
Gma01g02162 297 Gene3D - 4 297 - -
Gma01g02162 297 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 10 294 - -
Gma01g02162 297 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 289 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02162 Gma-Chr1 56912024 56913207 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02162 K12451 - gmx:100787499 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02162 01 56912024 56913207 Gma01g02162 01 56912024 56913207 ECH
Gma17g01231 17 10858825 10860289 Gma01g02162 01 56912024 56913207 PCT
Gma05g00478 05 4542826 4543455 Gma01g02162 01 56912024 56913207 PCT