Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00478 ATGGACTTCCCAGCCAACGGCGCCTCCGCGGCCCATTCCCTCAACTTCCTCATCTACGGCCGCGCGGGCTGGATTGGCGGCCTCCTCGGCACCCTCTGCCGTGCCCAGGGCATCCCCTTCCAATACGGCTCCGGCCGCCTCCAGAACCGCGCCTCCCTCCAAGCCGACATAGCCCAGCTCAAGCCCACTCACGTCTTCAACGCCGCCGGCGTCACGGGCCGCCCCAACGTCGATTGGTGCGAATCCCACAAAGTCGAGACCATCCGAACCAACGTCATCGGAACCCTCACCCTCGCCGACGTCTGCCGCGACCACGGCCTCATTCTCATCAACTACGCCACCGACTGCATCTTCGAGTACGACTCCGATCACCCCCTTGGATCCGGAATCGGCTTCAAAGAAACCGACATTCCGAATTCGATGACTATATTGGATGAACTGCTTCCTATCTCCATTGAGATGGGGAAGAGGAATCTGACTGGGATCTGGAACTTTACTAACCCTGGAGTGGTTAGTCACAATGAAATCTTGGAGATGTACAGGGATTATGTTGACCCCAATTTCACTTGGAAGAACTTCACTCTTGAGGAACAGGCGAAGGTGATTGTTGCTCCCAGGAGCAACAATTAA 630 0.5683 MDFPANGASAAHSLNFLIYGRAGWIGGLLGTLCRAQGIPFQYGSGRLQNRASLQADIAQLKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVIGTLTLADVCRDHGLILINYATDCIFEYDSDHPLGSGIGFKETDIPNSMTILDELLPISIEMGKRNLTGIWNFTNPGVVSHNEILEMYRDYVDPNFTWKNFTLEEQAKVIVAPRSNN 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00478 209 PANTHER BNAC05G13120D PROTEIN 136 209 - -
Gma05g00478 209 PANTHER BNAC05G13120D PROTEIN 7 139 - -
Gma05g00478 209 Pfam RmlD substrate binding domain 16 136 IPR029903 -
Gma05g00478 209 Gene3D - 140 209 - -
Gma05g00478 209 Gene3D - 6 139 - -
Gma05g00478 209 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 136 209 - -
Gma05g00478 209 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 7 139 - -
Gma05g00478 209 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 12 193 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00478 Gma-Chr5 4542826 4543455 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00478 K12451 - gmx:100801553 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00478 05 4542826 4543455 Gma05g00478 05 4542826 4543455 ECH
Gma17g01231 17 10858825 10860289 Gma05g00478 05 4542826 4543455 GST
Gma05g00478 05 4542826 4543455 Gma01g02162 01 56912024 56913207 PCT