Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01223 ATGCGCCAGTTATCACCAACCTCAAATTTCTGTGAAAGGAATGAGGGCCACCCAAACGCATCAAATCACAAAGTACAGGATGAGCCCAACATGTTAACCACTTTGATTCCCAAATCCCCAACATGTCAACTACACCAAATGCAAAATCCCCATAATAACATTAACACAACACATTTGTCCCTTTCTCTCGTCGAAGCCAAGTGCATAGCCAACATATCCTTCTCCATGATCCTCACTGGCCTCTTACTCTATTCCCGCTCCGTGATCTCCATGCTCTTCCTCGGCCACCTCGGAGAACTCGCTCTCGCAGGTGGCTCCTTAGCCATTGGCTTCGCCAACATCACAGGATACTCTGTTCTCTCTGGCCTCGCCATGGGCATGGAACCCATCTGCGGCCAAGCCTTCGGCGCCAAAAGATTCAAACTTCTCGGCCTCACCATGCAGAGAACCGTTCTCCTTCTCCTCATAACCTCATGCCTCATCTCATTATTCTTCTGGCTCAACATGAAGAAAATATTACTCCTTTGCGCCCAAGAACAAGACATAGCCAACGAGGCAGAACTCTACATATTTTACTCCCTCCCTGATCTTGTATTGCAGTCGCTGCTACACCCTTTGAGAATCTACCTTCGGAGTCAATCAATAACGCTCCCTCTCACGTGCTGCGCCGCCGTTTCGATCCTCCTCCACGTGCCCGTCAACTACCTCTTCGTGTCTATCCTCAACCTCGGAATCAAAGGCGTTGCACTAAGCGCTGTTATCACAAACCTCAACCTCGTAGTGCTGTTGATTATTTATATAGTGTTTTCAGGCACGCACAAGAAAACATGGCCGGGTATTTCTCGCGAGTGCTTCAACGGATGGAAAAAGCTCTTGAATCTAGCGATTCCGAGTTGTGTTTCCGTTTGTCTGGAATGGTGGTGGTATGAAATTATGATTTTGCTCTGCGGGTTATTAGTTAACCCTCATGCAAGTGTTGCATCCATGGGGGTTTTGATTCAAACAACAGCTTTGATATACATTTTTCCGTCTTCTTTGAGTTTCGGAGTGTCCACGCGCGTTGGTAACGAGTTGGGAGCCGGGAATCCTCGGAGGGCGAAACTCGCGGCGATTGTCGGCCTCTGCTTCAGTTTTGTGTTTGGGCTTTCTGCTTTGGCGTTCGCTGTTTCAGTGAGGAATGTTTGGGCTTCGATGTTCACGCTCGATGGGGAAATCATTGCTTTGACGACGGCGGTGTTGCCGATTATTGGGCTCTGCGAGCTTGGGAACTGTCCCCAGACGACGGTTTGCGGCGTCCTGAGAGGGACGGCGAGGCCGAAATTGGGGGCGAACATAAACTTGGGTTGCTTCTACCTCGTGGGCATGCCCGTTGCGGTGTGGTTGGGGTTCTTTGCAGGGTTTGACTTCAAAGGGTTGTGGCTTGGGATGTTGGCGGCGCAAGGGTCGTGTATTGTGACGATGATGTTCGTGTTGGCTAGGACCAATTGGGAGGGTCAAGCGTTACGAGCTAAGGAACTCACTAGTTCTGATCCTAGGGAAGAGAAAAAACTAGTGGAAGAGGAACATGAGGAGAAAGGGTTTTTGGGATCATGTGCCACCAAAGAAGCTTCTGATTTGGTTGTTTGA 1626 0.4951 MRQLSPTSNFCERNEGHPNASNHKVQDEPNMLTTLIPKSPTCQLHQMQNPHNNINTTHLSLSLVEAKCIANISFSMILTGLLLYSRSVISMLFLGHLGELALAGGSLAIGFANITGYSVLSGLAMGMEPICGQAFGAKRFKLLGLTMQRTVLLLLITSCLISLFFWLNMKKILLLCAQEQDIANEAELYIFYSLPDLVLQSLLHPLRIYLRSQSITLPLTCCAAVSILLHVPVNYLFVSILNLGIKGVALSAVITNLNLVVLLIIYIVFSGTHKKTWPGISRECFNGWKKLLNLAIPSCVSVCLEWWWYEIMILLCGLLVNPHASVASMGVLIQTTALIYIFPSSLSFGVSTRVGNELGAGNPRRAKLAAIVGLCFSFVFGLSALAFAVSVRNVWASMFTLDGEIIALTTAVLPIIGLCELGNCPQTTVCGVLRGTARPKLGANINLGCFYLVGMPVAVWLGFFAGFDFKGLWLGMLAAQGSCIVTMMFVLARTNWEGQALRAKELTSSDPREEKKLVEEEHEEKGFLGSCATKEASDLVV 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01223 541 PANTHER MULTIDRUG RESISTANCE PROTEIN 55 513 - -
Gma17g01223 541 TIGRFAM matE: MATE efflux family protein 79 473 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma17g01223 541 MobiDBLite consensus disorder prediction 1 16 - -
Gma17g01223 541 CDD MATE_eukaryotic 65 500 IPR045069 GO:0042910|GO:1990961
Gma17g01223 541 Pfam MatE 76 236 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma17g01223 541 Pfam MatE 297 460 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma17g01223 541 PANTHER PROTEIN DETOXIFICATION 49 55 513 - -
Gma17g01223 541 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01223 Gma-Chr17 10763677 10765302 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01223 K03327 - gmx:100778250 1034.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01223 17 10763677 10765302 Gma17g01223 17 10763677 10765302 ECH
Gma17g01223 17 10763677 10765302 Gma05g00468 05 4457153 4458748 GST
Gma17g01223 17 10763677 10765302 Gma11g00239 11 1886072 1887767 PCT