Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00468 ATGCGCCAGTTATCACCAACCTCAAATCCCAAAGTACAAGATGAGCCCAACATGTTAGCCACCTTGATCCCCAAATCCCCAACATGTCAACAACAACAACAAATGCAAAATCACCATAATAATAATAATAACACCACTCATTTGTCCCTTTCCCTGAACGAAGCCAAGTGCATAGCCAACATCTCCTTCTCCATGGTCCTCACTGGTTTATTACTCTATTCCCGGTCCATGATCTCCATGCTCTTCCTCGGCCACCTCGGAGAACTCGCCCTCGCAGGTGGCTCCTTAGCCATCGGCTTCGCCAACATCACCGGCTACTCTGTTCTCTCTGGCCTCGCCATGGGCATGGAACCCATCTGCGGCCAAGCCTTCGGTGCCAGAAGATTCAAACTTCTCGGCCTCACCATGCAGAGAACCGTTCTCCTTCTTCTCGTAACCTCATGCCTCATCTCATTATTCTTCTGGCTCAACATGAGGAAAATATTACTCCTTTGCGGCCAAGAAGAAGACATAGCCAACGAGGCAGAACTCTACATACTCTACTCTCTCCCTGATCTTGTACTACAATCGCTGTTACACCCTTTGAGAATCTACCTTCGGAGCCAGTCAATAACGCTCCCTCTCACATGCTGCGCCGCCGTTTCGATTCTCCTCCACGTGCCCATCAACTACCTCTTCGTCTCAATCCTCAAGCTCGGAATCAAAGGCGTCGCGTTAAGCGCCGTCGTCACAAACCTCAACCTCGTCTGGTTGTTGATTGTTTACGTAGTTGTCTCCGGCACGCACAAGAAAACGTGGCCGGGTATTTCGCGCGAGTGCTTCCAGGGGTGGAATTCATGGAAAACGCTAATGAATCTCGCGATTCCGAGTTGCGTTTCCGTTTGTCTGGAATGGTGGTGGTACGAAATTATGATTTTGCTCTGCGGGTTGTTAGTTAACCCTCACGCAAGTGTGGCCTCCATGGGGGTTCTGATTCAAACAACGGCCTTGATATACATTTTTCCGTCTTCTTTGAGCTTCGGAGTGTCCACGCGCGTGGGGAACGAGTTGGGAGCCGGGAATCCTCGGAGGGCGAAACTCGCGGCGATGGTGGGCCTATGTTTCAGTTTTGTGTTCGGGCTTTCTGCTTTGGCGTTCGCAGTTTCAGTGAGGAATGTTTGGGCTTCCATGTTCACACTCGATGGACAAATCATTGCTTTGACGTCAGCGGTGTTGCCGATTATTGGGCTTTGCGAGCTCGGGAACTGTCCCCAGACGACGGTGTGCGGCGTCTTGAGAGGGACAGCGAGGCCCAAATTGGGGGCCAACATAAACTTGGGTTGCTTCTACCTCGTTGGAATGCCCGTTGCGGTGTGGTTGGGCTTCTTTGCAGGGTTTGACTTCAAAGGGTTGTGGCTGGGGATGTTGGCGGCGCAAGGGTCGTGTATGATGACGATGATGTTCGTGTTGGCAAGGACCAATTGGGAGGGTCAAGCGCTAAGAGCTAAGGAGCTCACAGACTCTGATTCTGGTGAGGAGAAAAATCTAATGGAAGAAGAAGAACAGGAGGAGGAAGGGTTTTTGGGATCTTGTGCCACCAAAGAAGGTTCTGTTTAA 1596 0.5094 MRQLSPTSNPKVQDEPNMLATLIPKSPTCQQQQQMQNHHNNNNNTTHLSLSLNEAKCIANISFSMVLTGLLLYSRSMISMLFLGHLGELALAGGSLAIGFANITGYSVLSGLAMGMEPICGQAFGARRFKLLGLTMQRTVLLLLVTSCLISLFFWLNMRKILLLCGQEEDIANEAELYILYSLPDLVLQSLLHPLRIYLRSQSITLPLTCCAAVSILLHVPINYLFVSILKLGIKGVALSAVVTNLNLVWLLIVYVVVSGTHKKTWPGISRECFQGWNSWKTLMNLAIPSCVSVCLEWWWYEIMILLCGLLVNPHASVASMGVLIQTTALIYIFPSSLSFGVSTRVGNELGAGNPRRAKLAAMVGLCFSFVFGLSALAFAVSVRNVWASMFTLDGQIIALTSAVLPIIGLCELGNCPQTTVCGVLRGTARPKLGANINLGCFYLVGMPVAVWLGFFAGFDFKGLWLGMLAAQGSCMMTMMFVLARTNWEGQALRAKELTDSDSGEEKNLMEEEEQEEEGFLGSCATKEGSV 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00468 531 TIGRFAM matE: MATE efflux family protein 74 465 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma05g00468 531 CDD MATE_eukaryotic 54 492 IPR045069 GO:0042910|GO:1990961
Gma05g00468 531 MobiDBLite consensus disorder prediction 497 531 - -
Gma05g00468 531 Pfam MatE 289 452 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma05g00468 531 Pfam MatE 66 225 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma05g00468 531 PANTHER PROTEIN DETOXIFICATION 49 44 505 - -
Gma05g00468 531 PANTHER MULTIDRUG RESISTANCE PROTEIN 44 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00468 Gma-Chr5 4457153 4458748 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00468 K03327 - gmx:100795165 979.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00468 05 4457153 4458748 Gma05g00468 05 4457153 4458748 ECH
Gma17g01223 17 10763677 10765302 Gma05g00468 05 4457153 4458748 GST
Gma05g00468 05 4457153 4458748 Gma11g00239 11 1886072 1887767 PCT