Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00239 ATGTGCCAGTTATCGTCATCTCCCTCCACTTTGTGTGATAGCAATGAGGGCCATCCAAACATGCCCACAACCAAAATTCATGAGGAGCCAGCTCACATGCTCCCCCTTTTGATCCCCAAACCCCCAACAACATTATTCGAACAAGGCCAAAATAACCATCAAACTAAAACCCATTTTTCCCTCGCTCTCAACGAAGTCAAATGCATAGCCAACATAGCATTACCCATGGTGCTAACCGGGTTATTACTCTATTCTCGCTCCGTAATCTCCATGCTCTTCCTCGGTCGTGTGGGTGAGCTTGCCTTAGCTGGTGGCTCTCTCGCCATTGGATTCGCCAACATCACGGGCTATTCTATTCTCTCGGGCCTCGCCATGGGCATGGAGCCCATTTGCGGCCAGGCTTTTGGGGCCAAAAGGTTCAAACTTTTGGGTCTCGCTATGCAGAGGACAATCGTCTTGCTTCTTCTAACTTCAGTTTTGATTTCATTCTTGTGGCTCAACATGAAGAAATTATTGATCCTATGTGGCCAACAAGAAGACATCGCCACCGAAGCTCAATCTTTCATACTATTTTCTATTCCCGATCTTGTAGCACAATCATTGCTACACCCTTTGAGAATCTACTTACGAAGTCAATCTATAACCCTACCTCTCACATACACCGCATCTCTGTCTATTCTCCTTCACGTACCCATCAACTACTTTCTCGTCTCTGTGCTTAAGCTTGGAATCAAAGGCATTGCCTTAGGCGCTGTTTGGACGAATTTTAACCTCGTTGTTTCGTTGATTCTCTACATATGGGTCTCCGGCGTATACAAAAAAACATGGCCAGGTGTTTCGTTGAAGGGCATCTTGAGCGGTTGGAAATCGCTTTTGAATTTGGCAATTCCAAGTTGCATTTCCGTATGCCTCGAGTGGTGGTGGTACGAAATCATGATTTTACTTTGCGGGTTATTGATTAATCCCCAAGCAACGGTTGCATCAATGGGGGTTCTGATACAAACCACTGCTCTGATATACATTTTCCCATCTTCCCTGAGCTTTGCGGTTTCCACACGTGTCGGAAATGAACTGGGTGCGGAGAATCCCAAAAAGGCAAAAGTCGCAGCACTGGTGGGGTTATGTATCAGTTACGGTTTGGGTTTCTCGGCATTATTTTTCGCCGTTTCGGTGAGGCAAGCGTGGGCTTCGATGTTCACACGTGACGCGGAGATCATTGCTTTGACGTCGATGGTGTTGCCCATCATTGGGCTCTGCGAATTGGGAAACTGTCCGCAAACAACGGTTTGTGGCGTTTTGAGGGGAACCGCGAGGCCCAAGTTGGGAGCGAATATAAATTTGGGTTGCTTCTATCTAGTGGGAATGCCCGTTGCGGTGAGGTTGAGTTTCTTTGCCGGCTTTGATTTCAAAGGCTTGTGGCTTGGTTTATTGGCCGCCCAAGCCTCTTGTATGTTCACCATGTTAATTGTGTTGGCTCGCACCAATTGGGAGGGCCAAGTTCAAAGAGCCAAAGAACTCACATCATCGTCTGAGGAACAAGATCAGAATTGCTTCTTCAGTTCCTGCGCTACCAAGGAATATTGCTCTGATTCATTATTAGTTTGA 1605 0.4679 MCQLSSSPSTLCDSNEGHPNMPTTKIHEEPAHMLPLLIPKPPTTLFEQGQNNHQTKTHFSLALNEVKCIANIALPMVLTGLLLYSRSVISMLFLGRVGELALAGGSLAIGFANITGYSILSGLAMGMEPICGQAFGAKRFKLLGLAMQRTIVLLLLTSVLISFLWLNMKKLLILCGQQEDIATEAQSFILFSIPDLVAQSLLHPLRIYLRSQSITLPLTYTASLSILLHVPINYFLVSVLKLGIKGIALGAVWTNFNLVVSLILYIWVSGVYKKTWPGVSLKGILSGWKSLLNLAIPSCISVCLEWWWYEIMILLCGLLINPQATVASMGVLIQTTALIYIFPSSLSFAVSTRVGNELGAENPKKAKVAALVGLCISYGLGFSALFFAVSVRQAWASMFTRDAEIIALTSMVLPIIGLCELGNCPQTTVCGVLRGTARPKLGANINLGCFYLVGMPVAVRLSFFAGFDFKGLWLGLLAAQASCMFTMLIVLARTNWEGQVQRAKELTSSSEEQDQNCFFSSCATKEYCSDSLLV 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00239 534 PANTHER PROTEIN DETOXIFICATION 44 516 - -
Gma11g00239 534 MobiDBLite consensus disorder prediction 1 25 - -
Gma11g00239 534 Pfam MatE 75 235 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma11g00239 534 Pfam MatE 297 458 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma11g00239 534 CDD MATE_eukaryotic 65 502 IPR045069 GO:0042910|GO:1990961
Gma11g00239 534 MobiDBLite consensus disorder prediction 1 21 - -
Gma11g00239 534 TIGRFAM matE: MATE efflux family protein 75 473 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma11g00239 534 PANTHER MULTIDRUG RESISTANCE PROTEIN 44 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00239 Gma-Chr11 1886072 1887767 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00239 K03327 - gmx:100795127 1045.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00239 11 1886072 1887767 Gma11g00239 11 1886072 1887767 ECH
Gma17g01223 17 10763677 10765302 Gma11g00239 11 1886072 1887767 PCT
Gma05g00468 05 4457153 4458748 Gma11g00239 11 1886072 1887767 PCT