Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01221 ATGGGTATTCGCTTTTCGTCCTCCCAGGCGGCGCCGTCGGAATCGTCGCCGGCGTCGAGTTTGGGCGAATTGCCCGAGAGTTGTGTCGCTCAGATCATGACCTACATGGATCCGCCCCAGATTTGCAAGCTCGCAACCCTCAATCGCGCTTTTCGCGGCGCTTCCTCCGCCGATTTCGTCTGGGAGTCCAAGCTGCCGCCCAATTACGACGTCCTTCTCCGCCGCATCTTCGCCGATTTCCCCTCCCATTTGGGCAAGAGAGGGATTTACGCCAGGCTTTGCAGGCTCAATTCTCTCGACGACGGCACCAAGAAAGTTTGGCTGGATCGAGGCATGGGTAAACTGTGTTTGTGCGTTTCGGCCAAGGGACTCTCCATAACAGGGATTGATGATAGGAGAAACTGGAACCATATCCCCACTGACGAATCTAGATTCAGCAGTGTTGCATACCTCCAGCAAATCTGGTGGTTTGAAGTGGATGGGGAAGTTGAGTTCCCATTTCCAGCTGGGAAATACAGCGTATTCTTCAGAATACATCTGGGGCGAGCCGGCAAGAGGTTTGGACGACGAGTCTGCAACACCGAGCATGTTCATGGTTGGGACAAAAAGCCTGTACGTTTCCAGCTATGGACTTCAGATGGACAGTATGTTGCATCCCAGTGTTTTCTGAACGGACCAGGTAAATGGATCTATTACCACGCAGGCGATTTTGTTGTCGAGGATGGCAATGCATCAACAAAAGTTAAATTCTCTATGACTCAAATTGATTGCACACATACTAAAGGGGGTCTCTGTTTAGATTCTGTGCTGATATATCCAAGTGAATTCAGAAAGGTTAAAGCATTTTTAAACTACTCTTAA 861 0.4983 MGIRFSSSQAAPSESSPASSLGELPESCVAQIMTYMDPPQICKLATLNRAFRGASSADFVWESKLPPNYDVLLRRIFADFPSHLGKRGIYARLCRLNSLDDGTKKVWLDRGMGKLCLCVSAKGLSITGIDDRRNWNHIPTDESRFSSVAYLQQIWWFEVDGEVEFPFPAGKYSVFFRIHLGRAGKRFGRRVCNTEHVHGWDKKPVRFQLWTSDGQYVASQCFLNGPGKWIYYHAGDFVVEDGNASTKVKFSMTQIDCTHTKGGLCLDSVLIYPSEFRKVKAFLNYS 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01221 286 PANTHER F-BOX PROTEIN PP2-A12 1 281 - -
Gma17g01221 286 SUPERFAMILY F-box domain 12 96 IPR036047 GO:0005515
Gma17g01221 286 MobiDBLite consensus disorder prediction 1 22 - -
Gma17g01221 286 PANTHER F-BOX PROTEIN PP2-A15 1 281 - -
Gma17g01221 286 Pfam Phloem protein 2 115 273 IPR025886 -
Gma17g01221 286 ProSiteProfiles F-box domain profile. 18 64 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01221 Gma-Chr17 10734394 10736816 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01221 - - gmx:100777716 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01221 17 10734394 10736816 Gma17g01221 17 10734394 10736816 ECH
Gma17g01221 17 10734394 10736816 Gma07g00704 07 7344957 7349113 ECH
Gma17g01221 17 10734394 10736816 Gma03g00148 03 1801093 1804368 ECH
Gma17g01221 17 10734394 10736816 Gma05g00465 05 4431813 4434648 GST