Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00148 ATGGGTGCTAGTTTTTCCTCTTGTGTTTGTGATGGGGATGGTACCCCTTTGAGACCAAGGCTTGGGGACATACCCGAGAGCTGTGTGGCATTGGTGTTGATGTATTTGGACCCACCGGATATTTGTAAGCTTGCACGATTGAACAGGGCGTTTCGTGATGCTTCGTCGGCGGATTTCATTTGGGAATCGAAGTTGCCTTTGAACTATAAGTTCATTGTGGAGAAAGCTTTGAAGGATGTTTCTGTGGAACAATTGGGGAAGAGGGATATTTATGCTAGACTCTGCAGGCCTAATTCGTTTGACAATGGGACCAAGGAAATTTGGCTGGATAAGAGGACAGGTGGGGTGTGTTTGGCGATTTCATCCCAAGCATTGAGGATTACAGGGATAGATGATCGGAGATATTGGAGTCGCATTTCAACTGAAGAGTCAAGATTCCACACAGTTGCTTATCTTCAACAAATTTGGTGGCTTGAAGTGGAAGATGATGTTGATTTTCAATTTCCACCTGGGAAATACAGTGTGTTTTTTAGACTCCAGCTTGGCAGGTCATCCAAGAGATTGGGTCGTCGTGTTTGTAAGACGGACGACATTCATGGCTGGGATATAAAACCTGTAAAATTTCAGCTAACAACTTCTGATGGTCAACGTGCTGTATCCCAAAGTCATTTGGATAATCCCGGGCACTGGGTTCTCTACCATGCAGGAAACTTTGTTTCCAAGAGTCCTAATGATCTGATGAAGATCAAATTTTCATTGACTCAAATTGATTGCACGCATACCAAAGGCGGTTTGTGTGTAGATTCTGTATTTATATGTAATAGTGATCTAAAAAAAGAGGTGTAG 846 0.4303 MGASFSSCVCDGDGTPLRPRLGDIPESCVALVLMYLDPPDICKLARLNRAFRDASSADFIWESKLPLNYKFIVEKALKDVSVEQLGKRDIYARLCRPNSFDNGTKEIWLDKRTGGVCLAISSQALRITGIDDRRYWSRISTEESRFHTVAYLQQIWWLEVEDDVDFQFPPGKYSVFFRLQLGRSSKRLGRRVCKTDDIHGWDIKPVKFQLTTSDGQRAVSQSHLDNPGHWVLYHAGNFVSKSPNDLMKIKFSLTQIDCTHTKGGLCVDSVFICNSDLKKEV 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00148 281 PANTHER F-BOX PROTEIN PP2-A15 1 281 - -
Gma03g00148 281 ProSiteProfiles F-box domain profile. 18 64 IPR001810 GO:0005515
Gma03g00148 281 SUPERFAMILY F-box domain 18 76 IPR036047 GO:0005515
Gma03g00148 281 SMART fbox_2 24 64 IPR001810 GO:0005515
Gma03g00148 281 Pfam Phloem protein 2 116 272 IPR025886 -
Gma03g00148 281 PANTHER F-BOX PROTEIN PP2-A13 1 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00148 Gma-Chr3 1801093 1804368 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00148 - - gmx:100789493 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00148 03 1801093 1804368 Gma03g00148 03 1801093 1804368 ECH
Gma07g00704 07 7344957 7349113 Gma03g00148 03 1801093 1804368 ECH
Gma05g00465 05 4431813 4434648 Gma03g00148 03 1801093 1804368 ECH
Gma17g01221 17 10734394 10736816 Gma03g00148 03 1801093 1804368 ECH