Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00465 ATGCGCGTGCATTCCGTCAAGTCCAAGTCAGATACCGCTGTCTGGCGGAAACAGAGAAAGGCACAAAACCAAGTCCCTCTTCTTACCTACAAACTCACAACCTTTTCCTTCCGCCATATAAAATCTACTATTATTTCTCATTTTCATTTCAACGTAACGTTGATGGGTCTTCGCTTTTCGTCTTCCGAGGCGGCGGCGTCGGAATCGGCATCGCCATCGTCCAGTTTGGGCGAATTGCCCGAGAGCTGCGTCGCCCAGATCATGACCTACATGGATCCGCCCCAGATTTGCAAGCTCGCAACCCTCAATCGCGCTTTTCGCGGCGCTTCCTCCGCCGATTTCGTCTGGGAGTCGAAGCTGCCGCCCAATTACGACATCCTTCTCCGCCGCATCTTCGCCGATTTCCCCTCCCATTTGGGAAAGAGGGGGATTTACGCCAGGCTTTGCAGGCTCAATTCTCTCGATGACGGCACCAAGAAAGTTTGGCTGGATCGTGGCATGGGTAAACTGTGTTTGTGCGTTTCGGCCAAGGGACTCTCCATAACCGGGATTGATGATAGAAGATACTGGAACCATATCCCCACTGACGAATCTAGATTCAGCAGTGTTGCATACCTCCAGCAAATCTGGTGGTTTCAAGTGGATGGGGAAGTTGAGTTCCCATTTCCAGCTGGGAAATACAGCGTATTCTTCAGAATACATCTGGGGCGAGCCGGCAAGAGGTTTGGACGACGAGTTTGCAACACGGAGCATGTTCATGGGTGGGACAAAAAGCCTGTTCGTTTCCAGCTATGGACTTCAGATGGACAGTATGTTGCGTCCCAGTGTTTTCTGAACGGACCAGGTAAATGGATCTTTTACCATGCAGGCGATTTTGTTGTCGAGGATGGCAATGCATCAACAAAAGTTAAATTCTCTATGACTCAGATTGATTGCACACATACTAAAGGTGGTCTCTGTTTAGATTCTGTGCTCGTATATCCAAGTGAATTCAGAAAGGTTAAAGCATTTTTAAACTACTCTTAA 1026 0.4873 MRVHSVKSKSDTAVWRKQRKAQNQVPLLTYKLTTFSFRHIKSTIISHFHFNVTLMGLRFSSSEAAASESASPSSSLGELPESCVAQIMTYMDPPQICKLATLNRAFRGASSADFVWESKLPPNYDILLRRIFADFPSHLGKRGIYARLCRLNSLDDGTKKVWLDRGMGKLCLCVSAKGLSITGIDDRRYWNHIPTDESRFSSVAYLQQIWWFQVDGEVEFPFPAGKYSVFFRIHLGRAGKRFGRRVCNTEHVHGWDKKPVRFQLWTSDGQYVASQCFLNGPGKWIFYHAGDFVVEDGNASTKVKFSMTQIDCTHTKGGLCLDSVLVYPSEFRKVKAFLNYS 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00465 341 ProSiteProfiles F-box domain profile. 73 119 IPR001810 GO:0005515
Gma05g00465 341 PANTHER F-BOX PROTEIN PP2-A12 55 336 - -
Gma05g00465 341 SUPERFAMILY F-box domain 67 151 IPR036047 GO:0005515
Gma05g00465 341 Pfam Phloem protein 2 170 328 IPR025886 -
Gma05g00465 341 PANTHER F-BOX PROTEIN PP2-A15 55 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00465 Gma-Chr5 4431813 4434648 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00465 - - gmx:100788842 689.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00465 05 4431813 4434648 Gma05g00465 05 4431813 4434648 ECH
Gma05g00465 05 4431813 4434648 Gma07g00704 07 7344957 7349113 ECH
Gma05g00465 05 4431813 4434648 Gma03g00148 03 1801093 1804368 ECH
Gma17g01221 17 10734394 10736816 Gma05g00465 05 4431813 4434648 GST