Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01203 ATGGGTCATCGTTTGACGACGTTTGTTGCTCTGCATCAAAGAGAGAAAAAGAGAGAGAGAGAAAGAAAAGTAATGGCAATGGCAACGATGGAAGAGATTCCACAAAGCCCAGAAGCGAAGTTGGGGATGCGAGTGGAGGATCTTTGGGACGTTCAGGAGGCACAGTTGAGTCCCACCGAGAAGCTCAACGCTTGTTTTGAAAGCATCCCTGTCTCTGCTTTTCCTTTGGATCCTTCAAACACAGAAATTGAGATTAAATCAGACGCCACCCTAGCAGATGCTGTTAAGATATTGGCAGGACACAACGTTTTCAGCGCGCCTGTGGTGGATGTTGAGGCGCCTGAAGACGCTAGTTGGATTGACAGATACATCGGAATTGTTGAGTTTGCTGGAATTGTTGTATGGATTTTGCATCAGTCTGAACCTACGTCTCCGAGGACTCCGTCCACTCCATCCAGTGCAAGGGCTATTGCAGCTGCAGCTAATGGAGCGGCTTTTGCTCTAGAACTTGAAGCCTTAGGCCTTGGATCTGCTGCAACAACTGCAGGGAACTTTTTTGAGGATCTCACTTCTTCTGAACTTTATAAGAATACCAAGGTTCGTGATATTTCAGGGACATTCCGCTGGGCCCCGTTTCTTGCTTTAGAGAGATCAAACTCATTTCTAACCATGCTCTTGCTGCTTTCTAAGTACAAGATGAAGAGTGTTCCTGTGTTGGATTTAGGCTCTGGTGCAATTGATAACATTATTACACAATCTGCTGTGATTCATATGCTGGCAGAATGCGCTGGACTTCAGTGGTTCGAAAGTTGGGGAACCAAGAAACTATCTGAAGTTGGTCTTCCCCTGGTGACAGGAAATCAAATCATCAAGGTTTATGAGGATGAACCAGTCCTCCAAGCATTTAAAGTAATGAGGAAAAAAAGGGTCGGAGGGGTTCCTGTAATCGAAAGAGAGACCAAAAAAGCAGTTGGTAATATAAGTTTGCGAGACGTTCAATTCTTGCTAACTGCACCAGAAATCTATCATGATTATAGAGGTATTACAGTAAAAGACTTCCTAACTGAGGTTAGAAGCTACTTGGAGAAGAATAAAAATGCATCCCCAATGTTAAATGAATATGTCACATGCAAAAAGGACTGTACAATCAAAGAGTTGATTCAACTACTTGATCAAGAGAAGATTCACAGGGTCTATGTGGTGGACGATGATGGGGATTTGCAAGGACTAATCACACTAAGAGATATCATCTCAAGGCTAGTACACGAACCGCGTGGCTATTTTGGTGATTTCTTTGATGGTGTTCTACCGCTGCCTGCAAACAGCAGAGTTTAA 1335 0.4375 MGHRLTTFVALHQREKKRERERKVMAMATMEEIPQSPEAKLGMRVEDLWDVQEAQLSPTEKLNACFESIPVSAFPLDPSNTEIEIKSDATLADAVKILAGHNVFSAPVVDVEAPEDASWIDRYIGIVEFAGIVVWILHQSEPTSPRTPSTPSSARAIAAAANGAAFALELEALGLGSAATTAGNFFEDLTSSELYKNTKVRDISGTFRWAPFLALERSNSFLTMLLLLSKYKMKSVPVLDLGSGAIDNIITQSAVIHMLAECAGLQWFESWGTKKLSEVGLPLVTGNQIIKVYEDEPVLQAFKVMRKKRVGGVPVIERETKKAVGNISLRDVQFLLTAPEIYHDYRGITVKDFLTEVRSYLEKNKNASPMLNEYVTCKKDCTIKELIQLLDQEKIHRVYVVDDDGDLQGLITLRDIISRLVHEPRGYFGDFFDGVLPLPANSRV 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01203 444 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 27 444 - -
Gma17g01203 444 SUPERFAMILY CBS-domain pair 274 430 IPR046342 -
Gma17g01203 444 Gene3D - 59 264 IPR046342 -
Gma17g01203 444 CDD CBS_pair_SF 225 332 - -
Gma17g01203 444 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA 1-RELATED 27 444 - -
Gma17g01203 444 CDD CBS_pair_SF 288 417 - -
Gma17g01203 444 SUPERFAMILY CBS-domain pair 54 260 IPR046342 -
Gma17g01203 444 CDD CBS_pair_SF 85 144 - -
Gma17g01203 444 Gene3D - 273 423 IPR046342 -
Gma17g01203 444 Pfam CBS domain 289 332 IPR000644 -
Gma17g01203 444 Pfam CBS domain 370 421 IPR000644 -
Gma17g01203 444 SMART cbs_1 288 337 IPR000644 -
Gma17g01203 444 SMART cbs_1 373 421 IPR000644 -
Gma17g01203 444 SMART cbs_1 211 260 IPR000644 -
Gma17g01203 444 ProSiteProfiles CBS domain profile. 370 428 IPR000644 -
Gma17g01203 444 ProSiteProfiles CBS domain profile. 76 143 IPR000644 -
Gma17g01203 444 ProSiteProfiles CBS domain profile. 283 345 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01203 Gma-Chr17 10577756 10585043 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01203 - - gmx:100818156 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01203 17 10577756 10585043 Gma17g01203 17 10577756 10585043 ECH
Gma17g01203 17 10577756 10585043 Gma05g00448 05 4270913 4274527 GST
Gma17g01203 17 10577756 10585043 Gma04g01892 04 49188393 49191711 PCT
Gma17g01203 17 10577756 10585043 Gma06g01519 06 14641890 14645433 PCT
Gma04g01892 04 49188393 49191711 Gma17g01203 17 10577756 10585043 PCT
Gma06g01519 06 14641890 14645433 Gma17g01203 17 10577756 10585043 PCT