Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00448 ATGGCAATGGCAACAATGGGAGAGAGTCCACGAAGCCCAGAAGCGAAGTTGGGGATGCGAGTGGAGGATCTTTGGGACGTTCAGGAGCCACAGTTGAGTCCCACTGAGAAGCTCAACGCTTGTTTTGAAAGCATCCCTGTCTCTGCTTTTCCTTTGGATCCTTCAAACACAGAAATTGAGATTAAATCAGACGCGACCCTAGCAGATGCTGTTAAGATATTGGCGCGACACAACGTATTCAGCGCACCTGTGGTGGATGTTGAGGCGCCTGAAGATGCTAGTTGGATGGATAGATACATCGGAATTGTTGAGTTTGCTGGAATTGTTGTATGGATTTTGCATCAGTCTGAACCTACATCTCCTAGGTGTCCATCCACTCCATCCAGTGCAAGGGCTATTGCAGCTGCAGCTAATGGAGCGGCTTTTGCTCTAGAACTTGAAGCCTTAGGCCTCGGATCTGCTGCAACAACTGCAGGAAACTTTTTTGAGGATCTCACTTCTTCTGAACTTTATAAGAATACCAAGGTTCGTGATATTTCAGGGACATTCCGCTGGGCGCCGTTTCTTGCTTTAGAGAGATCAAACTCATTTCTAACCATGCTCTTGCTGCTTTCTAAGTACAAGATGAAGAGTGTTCCTGTGTTGGATTTAGGCTCTGGTACAATTGATAACATTATTACACAATCTGCTGTGATTCATATGCTGGCAGAATGCGCTGGACTTCAGTGGTTCGAAAGTTGGGGAACCAAGAAGCTATCTGAAGTTGGTCTTCCCCTGGTGACAGGAAATCAAATCATCAAGGTTTATGAGGATGAACCAGTCCTCCAAGCATTTAAAGTAATGAGGAAAAAGAGGGTTGGAGGGGTGCCTGTAATCGAAAGAGAGACCAAAAAGGCAGTTGGTAATATAAGTTTGCGAGACGTTCAATTCTTGCTAACTGCACCAGAAATCTATCATGATTATAGAGGTATTACAGTAAAGAACTTCCTGACTGAGGTTAGAAGCTACTTGGAGAAGAATAAAAATGCATCCCCAATGTTAAGTGAATATGTCACATGCAAAAAGGACTGCACAATCAAAGAATTGATTCAGCTGCTTGATCAAGAGAAGATTCATAGAGTCTATGTAGTGGAGGATGATGGGGATCTGCAAGGACTAATCACACTAAGAGATATCATCTCAAGGCTAGTACACGAACCGCGTGGCTATTTTGGTGATTTCTTTGATGGCGTTCTACCGCTGCCTGCAAACACCAGAGTTTAA 1263 0.441 MAMATMGESPRSPEAKLGMRVEDLWDVQEPQLSPTEKLNACFESIPVSAFPLDPSNTEIEIKSDATLADAVKILARHNVFSAPVVDVEAPEDASWMDRYIGIVEFAGIVVWILHQSEPTSPRCPSTPSSARAIAAAANGAAFALELEALGLGSAATTAGNFFEDLTSSELYKNTKVRDISGTFRWAPFLALERSNSFLTMLLLLSKYKMKSVPVLDLGSGTIDNIITQSAVIHMLAECAGLQWFESWGTKKLSEVGLPLVTGNQIIKVYEDEPVLQAFKVMRKKRVGGVPVIERETKKAVGNISLRDVQFLLTAPEIYHDYRGITVKNFLTEVRSYLEKNKNASPMLSEYVTCKKDCTIKELIQLLDQEKIHRVYVVEDDGDLQGLITLRDIISRLVHEPRGYFGDFFDGVLPLPANTRV 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00448 420 CDD CBS_pair_SF 201 308 - -
Gma05g00448 420 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 8 420 - -
Gma05g00448 420 CDD CBS_pair_SF 264 393 - -
Gma05g00448 420 Gene3D - 37 240 IPR046342 -
Gma05g00448 420 Gene3D - 249 399 IPR046342 -
Gma05g00448 420 PANTHER BNAA06G16460D PROTEIN 8 420 - -
Gma05g00448 420 CDD CBS_pair_SF 61 120 - -
Gma05g00448 420 SUPERFAMILY CBS-domain pair 30 236 IPR046342 -
Gma05g00448 420 ProSiteProfiles CBS domain profile. 259 321 IPR000644 -
Gma05g00448 420 ProSiteProfiles CBS domain profile. 52 119 IPR000644 -
Gma05g00448 420 SMART cbs_1 61 113 IPR000644 -
Gma05g00448 420 SMART cbs_1 349 397 IPR000644 -
Gma05g00448 420 SMART cbs_1 187 236 IPR000644 -
Gma05g00448 420 SMART cbs_1 264 313 IPR000644 -
Gma05g00448 420 ProSiteProfiles CBS domain profile. 346 404 IPR000644 -
Gma05g00448 420 Pfam CBS domain 265 308 IPR000644 -
Gma05g00448 420 Pfam CBS domain 346 397 IPR000644 -
Gma05g00448 420 SUPERFAMILY CBS-domain pair 250 406 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00448 Gma-Chr5 4270913 4274527 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00448 - - gmx:100812388 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00448 05 4270913 4274527 Gma05g00448 05 4270913 4274527 ECH
Gma17g01203 17 10577756 10585043 Gma05g00448 05 4270913 4274527 GST
Gma05g00448 05 4270913 4274527 Gma04g01892 04 49188393 49191711 PCT
Gma05g00448 05 4270913 4274527 Gma06g01519 06 14641890 14645433 PCT
Gma04g01892 04 49188393 49191711 Gma05g00448 05 4270913 4274527 PCT
Gma06g01519 06 14641890 14645433 Gma05g00448 05 4270913 4274527 PCT