Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01892 ATGGTGACTATGGAAGAGAGTCCAAGGAGCCCAGAGGCGAAGCTGGGGTTGCGAGTGGAGGATTTATGGGACATTCAAGAACCACAGCTAAGTCCTGATGAGAAGCTCAATGCTTGCTTTGAAAGCATCCCTGTCTCTGCCTTCCCTCCACCTCCTTCAAATCAAGAAGTTGAGATAAAATCAGATGCCACCCTAGCCGAGGCAGTAAAACTACTTGCAGAACACAGCATTCTCAGTGCACCTGTGGTGGATGTAGATGCACCCGAAGATGCTAGTTGGATTGACAGATATATAGGAATAGTTGAGTTTGCTGGAATTGTTGTTTGGATTCTGCATCAGTCTGAACCCACATCTCCTAGGAGTCCATCCAGTGGAGCTGCTAATACGGCTGCAGTTACTGGAGTAGCTTATGAAGCATTAGGCCTTGAATCTGCTGCGACAACTTCAGGCAATTTTTTCGAGGATCTGACTTCTTCTCAGCTATATAAGAATACCAAGGTTGTTCGTGACATTTCAGGGTCATTCCGTTGGGCCCCATTTCTCGCTTTGGAGAGATCAAACTCATTTTTGACCATGCTTTTGCTGCTTTCCAAGTACAAGATGAAGAGTATTCCTGTGGTGGACTTGGGTGCTGGTCGAATTGACAACATTATTACACAGTCTTCTGTAATTCACATGTTGGCAGAATGTGCTGGTCTTCAGTGGTTTGAGAGTTGGGGAACCAAGAAACTTTCTGAAGTTGGTCTTCCCATGGTGACACCAAATCATATTATCAAGGTTTATGAGGATGAACCAGTGCTTCAAGCATTTAAACTGATGAGGAAAAAGAGGATTGGAGGGTTGCCAGTGATGGAAAGGGGTGGCAGCAGGGCAATTGGTAACATAAGCCTGCAAGATGTTCAATTCCTCCTAACTGCTCCTGAAATCTACCATGATTATAGATCTATTACAGCAAAAGACTTCCTGACAGCCGTTAGAAGCTACTTAGAGAAGCATGAAGGGGCCTTTCCAATGTCAGGTGACCTGATTACATGCAATAAGAATTGCACAATCAAAGAATTGATTCAACTGCTTGACCATGAGAAGAATCATAGGGTCTACGTTGCTGACAATGAAGGGAATCTAGAAGGACTAATCACACTAAGAGATATCATATCAAGGCTAGTACATGAACCCCGTGGCTATTTTGGCGATTTCTTTGATGGGGTTCTCCCGATGCCTCCAAACAGCAGGGTTTGA 1239 0.4447 MVTMEESPRSPEAKLGLRVEDLWDIQEPQLSPDEKLNACFESIPVSAFPPPPSNQEVEIKSDATLAEAVKLLAEHSILSAPVVDVDAPEDASWIDRYIGIVEFAGIVVWILHQSEPTSPRSPSSGAANTAAVTGVAYEALGLESAATTSGNFFEDLTSSQLYKNTKVVRDISGSFRWAPFLALERSNSFLTMLLLLSKYKMKSIPVVDLGAGRIDNIITQSSVIHMLAECAGLQWFESWGTKKLSEVGLPMVTPNHIIKVYEDEPVLQAFKLMRKKRIGGLPVMERGGSRAIGNISLQDVQFLLTAPEIYHDYRSITAKDFLTAVRSYLEKHEGAFPMSGDLITCNKNCTIKELIQLLDHEKNHRVYVADNEGNLEGLITLRDIISRLVHEPRGYFGDFFDGVLPMPPNSRV 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01892 412 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 7 412 - -
Gma04g01892 412 ProSiteProfiles CBS domain profile. 251 313 IPR000644 -
Gma04g01892 412 CDD CBS_pair_SF 256 385 - -
Gma04g01892 412 SUPERFAMILY CBS-domain pair 29 228 IPR046342 -
Gma04g01892 412 Pfam CBS domain 257 300 IPR000644 -
Gma04g01892 412 Pfam CBS domain 338 389 IPR000644 -
Gma04g01892 412 SMART cbs_1 55 111 IPR000644 -
Gma04g01892 412 SMART cbs_1 341 389 IPR000644 -
Gma04g01892 412 SMART cbs_1 256 305 IPR000644 -
Gma04g01892 412 SMART cbs_1 179 228 IPR000644 -
Gma04g01892 412 SUPERFAMILY CBS-domain pair 251 398 IPR046342 -
Gma04g01892 412 PANTHER BNAA06G16460D PROTEIN 7 412 - -
Gma04g01892 412 Gene3D - 37 233 IPR046342 -
Gma04g01892 412 CDD CBS_pair_SF 59 118 - -
Gma04g01892 412 Gene3D - 241 391 IPR046342 -
Gma04g01892 412 ProSiteProfiles CBS domain profile. 52 117 IPR000644 -
Gma04g01892 412 ProSiteProfiles CBS domain profile. 338 396 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01892 Gma-Chr4 49188393 49191711 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01892 - - gmx:100780629 794.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01892 04 49188393 49191711 Gma04g01892 04 49188393 49191711 ECH
Gma04g01892 04 49188393 49191711 Gma06g01519 06 14641890 14645433 GST
Gma17g01203 17 10577756 10585043 Gma04g01892 04 49188393 49191711 PCT
Gma05g00448 05 4270913 4274527 Gma04g01892 04 49188393 49191711 PCT
Gma04g01892 04 49188393 49191711 Gma17g01203 17 10577756 10585043 PCT
Gma04g01892 04 49188393 49191711 Gma05g00448 05 4270913 4274527 PCT