Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01166 ATGACCAATAGGAGCTTGAGGAGATTGGAGACATACACTATGGGTTCTGCTAACGGACTAACTGCTATAAATGGGAAACAACCTCTCTTTTCTTTTGGGTTGATATCCGATGTGCAATATGCTGACATTCCTGATGGTAGGTCATTCCTTGGTGTTCCACGGTACTATAGGCATAGCATTGTAGTGTTACAGAGAGCAGTAAAAGAATGGAATACTAGTAAGAGGCACAAGTTTGTGATAAATTTTGGGGATATTGTTGATGGGTTTTGTCCAAAAGATCAATCTCTTAGCACTGTAAAGAAACTTGTGGATGAATTTGAGATGTTCAACGGACCAGTGTACCATTTGATTGGCAATCACTGCCTATACAATCTGCCTCGAATTCTTGATGGCTATGACATAAGTGCGATTGGCTGGCCTCAGGATCATCCAAAAACATTGGAGGCCTTGAAATTCCTCCGGGAGAAGAATCCAAATGAAGACAAGAACAGTCCAACAGGTTTGGTGGGCCTTGAAAGAAGGTTTCTTATGTTTAATGGAGCTATTGGAAAGGAACAAATGGAATGGTTGAATAATGTTCTTCAAGAAGCAACAAAATTGAAACAGAAGGTGGTGGTGTGTTGCCATCTCCCTCTAGATCCTGGTGCATCATCTAAGGAGGCACTGTTATGGAATTATGCTGAAGTAATGAATTTGATACACAAATACACTTGTGTGAAGCTTTGTCTATCTGGACATGATCACAAAGGTGGATACTCCCTTGATTCCCATGGAGTTCACCATAGAGTTCTTGAAGCTGCCCTGGAATGTCCTACTGGAACGGATGCATTTGGATATGCTGATGTTTATGATGATAGAGTATCACTTTATGGTACTGACAGAATGCAGAGTACAGACATGTATTTTCATCCTAAAGCAGATTTGTGA 927 0.4078 MTNRSLRRLETYTMGSANGLTAINGKQPLFSFGLISDVQYADIPDGRSFLGVPRYYRHSIVVLQRAVKEWNTSKRHKFVINFGDIVDGFCPKDQSLSTVKKLVDEFEMFNGPVYHLIGNHCLYNLPRILDGYDISAIGWPQDHPKTLEALKFLREKNPNEDKNSPTGLVGLERRFLMFNGAIGKEQMEWLNNVLQEATKLKQKVVVCCHLPLDPGASSKEALLWNYAEVMNLIHKYTCVKLCLSGHDHKGGYSLDSHGVHHRVLEAALECPTGTDAFGYADVYDDRVSLYGTDRMQSTDMYFHPKADL 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01166 308 PANTHER - 128 305 - -
Gma17g01166 308 PANTHER - 16 127 - -
Gma17g01166 308 Gene3D - 128 295 IPR029052 -
Gma17g01166 308 Gene3D - 25 127 IPR029052 -
Gma17g01166 308 Pfam Calcineurin-like phosphoesterase 31 249 IPR004843 GO:0016787
Gma17g01166 308 SUPERFAMILY Metallo-dependent phosphatases 28 298 IPR029052 -
Gma17g01166 308 CDD MPP_Nbla03831 30 289 IPR041869 -
Gma17g01166 308 PANTHER MANGANESE-DEPENDENT ADP-RIBOSE/CDP-ALCOHOL DIPHOSPHATASE 128 305 - -
Gma17g01166 308 PANTHER MANGANESE-DEPENDENT ADP-RIBOSE/CDP-ALCOHOL DIPHOSPHATASE 16 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01166 Gma-Chr17 10152280 10153359 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01166 K01517 - gmx:100808714 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01166 17 10152280 10153359 Gma17g01166 17 10152280 10153359 ECH
Gma17g01166 17 10152280 10153359 Gma05g00404 05 3788372 3791500 GST
Gma17g01166 17 10152280 10153359 Gma04g01836 04 48484477 48486741 PCT
Gma06g01575 06 15285610 15293245 Gma17g01166 17 10152280 10153359 PCT