Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01575 ATGTGTTCCTTGACTAATCCTGTGTCTCCGACAACACAACTAAGCCTTAACGACTCAATTTCATTAGCATTAGCGTCTCGCAATACGCAGGTCGCAAACCGGACTCGCTGCCTAGTACTAGCGCACTTTCATTTTGCCGCTTCTCTGTTTTCAACAAACGACAACAACCTACATTGCCGTTTCAAATCACTATTTATCCCCGAGGCACAAAGAGAGGGAGACATCATGGTTTCTTCTAATGGACTAGCTACTACACAACCTCTTTTTTCTTTTGGATTGATTTCTGATGTTCAATATGCTGACATTCCTGATGGTCGCTCATTCCTTGGTGTTCCACGGTATTATAAGCATAGTATTCTTGTGTTGCGGAGAGCGGTTAAAGAATGGAACACTCATCAGAAGCATAAGTTTGCTATTAATTTTGGAGATATTGTTGATGGGTTTTGTCCCAAAGATCAATCTCTTGGTACTATAAAGAAACTAGTGGACGAATTTGAGATGTTCAGGGGAGGACCTGTGCATCATATTATTGGCAATCATTGCCTATACAATCTTCCTCGCAGCGAGTTACTTCCATTATTGAAGATCAAAACACTTGATGGCCGTGCTTACTATGATTTCTCACCAGTGCCTGAATATAGATTCGTAGTTCTTGATGGCTATGATATCAGTGCCATTGGTTGGCCAAAAGATCATCCAAAAACATTGGAGGCCTTGAAAATCTTAAGGGAGAAGAATCCAAATGAAAATAAGAACAGTCCAATAAATATGGAGGGGCTTGAAAGAAGGTTTCTCATGTTTAATGGAGCCATTGGAAAGGAACAGATGAAATGGTTGGATGATGTTCTCCTGGAGGCAACAAAATTGAAACAGAAAGTGGTTATTTGTTGCCATCTGCCTCTAGATCCTGGCGCGGCAAGTGAGAAGGGACTGTTGTGGAATTATGATGAAGTAATGAATTTGATACACAAATATAATTGTGTTAAGGTATGTCTTGCTGGACATTATCATAGAGGTGGATACTCCATTGATTCTCATGGGATACACCATAGAGTTCTTGAAGCTGCTTTGGAATGTCCTCCTGGTACGGATGCATTTGGATACATTGATGTCTATGATGACAGGATATCACTTGTTGGAACTGACAGAATGAAAAGTACAGAGATGCATTTTACTCCCCCAAATATAATCGGCCTTGAATGGTTTAAACAAAAGCATGCACGCCTAGTTCTTGTAGGTTCTTCGGTCAATGAATATGATTATGAGATGGAAGGGAGTACCTTCTTTGGCTTCTTCCTAAGTCCTAACCTTGACGAGGCCAATTCCATTCATTTTGATGTGTCTCTGTTTTCAACAAACGTTCACAACAACACATTTCGCCGTTTCAAATCACTACTTAACACCGGGGCACATAGAGAGAGAGAGACATCATGTCTTCTCATATTGCAGAGAGCAGTTAAAGAATGGAACTCTCATCAGAGGCACAAGTTTGTGATTAATTTTGGAGATATTGTTGATGGGTTTTGTCCCAAAGATCAATCTCTTGATACTGTAAAGAAAGTTGTTGATGAATTTGAGATGTTCACAGGAGGACCTGTGTATCATATGATTGGCAATCACTGCCTATACAATCTTCCTCGCAGCAAGTTACTTTCATTACTGAAGATCCATACTCTTGATGGCCGCGCATACTATGATTTCTCGCCAGTGCCTGAATATAGATTTGTTGTTCTGGATGCCTATGACATCAGTGCCATTGGTTGGCCTCAAGATCATCCAAAAACACTGGAGGCCTTGAAAATCCTAAGGGAGAAGAATCCAAATGAAGATAAGAACAGTCCAACAAATTTGGAGGGTCCTGAACGAAGGTTTGTAATGTTTAATGGAGCTGTTGGAAAGGAACAGGTCGAATGGTTAGATGGTGTTCTCTTGGAGTCAACAAACTTGAAACAGAAGGTGGTTGTCTGCTGCCATCTGCCTCTACATCCTGGTGCGGCAACTGAAGAGACACTGTTGTGGAATTACGATGAAGTAATGAATTTGATACACAGATACAATTGCGTTAAGGTCTGTCTTGCAGGGCATGATCATAAAGGCGGATACTCTATTGATTCTCATGGGATACACCATAGAGTTTTTGAAGCTGCTTTGGAATGCCCTCCTGGTACGGATGCATTTGGATACATTGATGTCTATGATGACAGGATATCACTTGTTGGAACTGACAGAATGAAAAGTACAGAGATGGATTTTACTCCCCCAAGTTAA 2268 0.4087 MCSLTNPVSPTTQLSLNDSISLALASRNTQVANRTRCLVLAHFHFAASLFSTNDNNLHCRFKSLFIPEAQREGDIMVSSNGLATTQPLFSFGLISDVQYADIPDGRSFLGVPRYYKHSILVLRRAVKEWNTHQKHKFAINFGDIVDGFCPKDQSLGTIKKLVDEFEMFRGGPVHHIIGNHCLYNLPRSELLPLLKIKTLDGRAYYDFSPVPEYRFVVLDGYDISAIGWPKDHPKTLEALKILREKNPNENKNSPINMEGLERRFLMFNGAIGKEQMKWLDDVLLEATKLKQKVVICCHLPLDPGAASEKGLLWNYDEVMNLIHKYNCVKVCLAGHYHRGGYSIDSHGIHHRVLEAALECPPGTDAFGYIDVYDDRISLVGTDRMKSTEMHFTPPNIIGLEWFKQKHARLVLVGSSVNEYDYEMEGSTFFGFFLSPNLDEANSIHFDVSLFSTNVHNNTFRRFKSLLNTGAHRERETSCLLILQRAVKEWNSHQRHKFVINFGDIVDGFCPKDQSLDTVKKVVDEFEMFTGGPVYHMIGNHCLYNLPRSKLLSLLKIHTLDGRAYYDFSPVPEYRFVVLDAYDISAIGWPQDHPKTLEALKILREKNPNEDKNSPTNLEGPERRFVMFNGAVGKEQVEWLDGVLLESTNLKQKVVVCCHLPLHPGAATEETLLWNYDEVMNLIHRYNCVKVCLAGHDHKGGYSIDSHGIHHRVFEAALECPPGTDAFGYIDVYDDRISLVGTDRMKSTEMDFTPPS 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01575 755 SUPERFAMILY Metallo-dependent phosphatases 479 745 IPR029052 -
Gma06g01575 755 CDD MPP_Nbla03831 89 378 IPR041869 -
Gma06g01575 755 PANTHER MANGANESE-DEPENDENT ADP-RIBOSE/CDP-ALCOHOL DIPHOSPHATASE 477 755 - -
Gma06g01575 755 PANTHER MANGANESE-DEPENDENT ADP-RIBOSE/CDP-ALCOHOL DIPHOSPHATASE 76 394 - -
Gma06g01575 755 Pfam Calcineurin-like phosphoesterase 486 698 IPR004843 GO:0016787
Gma06g01575 755 Pfam Calcineurin-like phosphoesterase 90 338 IPR004843 GO:0016787
Gma06g01575 755 Gene3D - 84 384 IPR029052 -
Gma06g01575 755 Gene3D - 466 744 IPR029052 -
Gma06g01575 755 PANTHER - 477 755 - -
Gma06g01575 755 PANTHER - 76 394 - -
Gma06g01575 755 SUPERFAMILY Metallo-dependent phosphatases 87 384 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01575 Gma-Chr6 15285610 15293245 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01575 K01517 - gmx:100815255 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01575 06 15285610 15293245 Gma06g01575 06 15285610 15293245 ECH
Gma06g01575 06 15285610 15293245 Gma17g01166 17 10152280 10153359 PCT
Gma06g01575 06 15285610 15293245 Gma05g00404 05 3788372 3791500 PCT