Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma04g01836 | ATGCAAAATTTTGATTGTGACTGCCTCTTTTTTTCTTTTGGATTGATTTCTGATGTCCAATATGCCGACATTCCTGATGGCCGCTCATTCCTTGGTGTTCCATGGTATTATAGGCATAGTATTTTTGTGTTGCGGAGAGCGGTTAAAGAATGGAACACTCATCAGAAGCATAAGTTTGCTATTAATTTTGGAGATATTGTTGATGGATTTTGCCCCAAAGATCAGTCTCTTGGTACTATTAAGAAAGTAGTGGACGAATTTGAGATGTTCAGGGGAGGACTTGTGTATCATATGATTGGCAATCATTGCCTATACAATCTTCCTCTGCTATTTGTAGTTCTGGATGGCTATGACATCAGTGCCATTGGTTGGCCAAAAGATCATCCTAAAAGATTGGAGGCCTTGAAAATCTTAAGGGAGAAGAATCCAAATGAAGATAAGAACAATCCAGTAAATATGGAGGGGCTTGAAAGAAGGCAACAAAATTTAAACAGAAAGTGGTTATCTGTTGCCATCTATCTGCCTCTTGATCCTGGCGCGGCAAGTGAGAAGGGACTTGTGTGGAATTATGATGAAATAATGAATTTGATACACAAATACAATTGTGTTAAGGTATGTCTTGCTGGACATCATCATAGAGGTGGATGCTCCATTGATTCTCGTGGGATACACCATAGAGTTCTTGAAGCTGCTTTGGAATGTCCTCCAGGAACCAACCAGTATGTGCTCAACATGCTCCTTCCTTTTGAGAGAGGGAAGGATGCAACACGCAGCATTGCTTAA | 783 | 0.4036 | MQNFDCDCLFFSFGLISDVQYADIPDGRSFLGVPWYYRHSIFVLRRAVKEWNTHQKHKFAINFGDIVDGFCPKDQSLGTIKKVVDEFEMFRGGLVYHMIGNHCLYNLPLLFVVLDGYDISAIGWPKDHPKRLEALKILREKNPNEDKNNPVNMEGLERRQQNLNRKWLSVAIYLPLDPGAASEKGLVWNYDEIMNLIHKYNCVKVCLAGHHHRGGCSIDSRGIHHRVLEAALECPPGTNQYVLNMLLPFERGKDATRSIA | 260 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma04g01836 | 260 | PANTHER | MANGANESE-DEPENDENT ADP-RIBOSE/CDP-ALCOHOL DIPHOSPHATASE | 111 | 163 | - | - | |
| Gma04g01836 | 260 | PANTHER | MANGANESE-DEPENDENT ADP-RIBOSE/CDP-ALCOHOL DIPHOSPHATASE | 168 | 241 | - | - | |
| Gma04g01836 | 260 | PANTHER | MANGANESE-DEPENDENT ADP-RIBOSE/CDP-ALCOHOL DIPHOSPHATASE | 10 | 108 | - | - | |
| Gma04g01836 | 260 | SUPERFAMILY | Metallo-dependent phosphatases | 11 | 242 | IPR029052 | - | |
| Gma04g01836 | 260 | Pfam | Calcineurin-like phosphoesterase | 12 | 213 | IPR004843 | GO:0016787 | |
| Gma04g01836 | 260 | PANTHER | - | 168 | 241 | - | - | |
| Gma04g01836 | 260 | PANTHER | - | 10 | 108 | - | - | |
| Gma04g01836 | 260 | PANTHER | - | 111 | 163 | - | - | |
| Gma04g01836 | 260 | Gene3D | - | 8 | 109 | IPR029052 | - | |
| Gma04g01836 | 260 | Gene3D | - | 110 | 247 | IPR029052 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gma04g01836 | Gma-Chr4 | 48484477 | 48486741 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma04g01836 | K01517 | - | gmx:100815255 | 400.979 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gma04g01836 | 04 | 48484477 | 48486741 | Gma04g01836 | 04 | 48484477 | 48486741 | ECH | |
| Gma17g01166 | 17 | 10152280 | 10153359 | Gma04g01836 | 04 | 48484477 | 48486741 | PCT | |
| Gma05g00404 | 05 | 3788372 | 3791500 | Gma04g01836 | 04 | 48484477 | 48486741 | PCT |