Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01040 ATGTCTGGTGGCACACAGAAGAGTCTGAGAAAAGCACTTGGAGCCCTTAAGGACACCACAACAGTCTCGTTGGCTAAGGTCAACAGTGATTACAAGGAATTGGACATTGCTATAGTTAGAGCCACAAATCATGTTGAACGTCCGGCTAAGGAAAAACATATAAGAGCTATATTTTCAGCTATCTCAGCTACAAGACCCAGGGCTGATGTTGCCTATTGTATCCACGCACTTGCCAGGCGGTTATCAAAGACACATAACTGGGCGGTTGCTTTGAAAACTTTAATTGTTATTCACCGTGCTCTAAGGGAAGTGGATCCTACATTTCATGAAGAACTCATAAATTATGGGAGAAGTAGAAGTCATATGCTCAACATGGCTCATTTTAAAGATGATTCCAGTCCAAATGCATGGGATTATTCTGCCTGGGTCCGCACTTATGCCTTATTTTTGGAGGAGAGGCTGGAATGTTTCCGTGTGTTGAAGTATGACATTGAGGCAGACCGTCCTAGGACCAAAGATTTGGATACTGCAGAACTGTTAGAGCAGTTGCCAGCTTTACAGCAACTTCTCAATCGGGTTATTGGTTGCCAGCCACACAGGGCAGCTGTAAATAACTTTGTCATTCAGTTAGCACTCTCAATGGTTGCTTCAGAAAGCATTAAAATTTATCAAGCTATTAGTGATGGAACAGTCAATATGGTTGATAAGTTTTTTGAGATGCAACGCCATGATGCTCTGAAAGCTCTTGATATATACAGGAGGGTTGGGCACCAGGCTGAGAGACTGTCAGAGTTTTATGAAATATGCCGTAATCTTGACATTGGACGGGGAGAGAAGTTTATTAAAGTTGAGCAGCCCCCTTCCTCATTTCTGCAAGCCATGGAAGAGTATGTCAAAGATGCTCCCCAGGGACCAATAGTTCACAAGGATCTGGCTATTGAGAACAAAGAAGTTTTGGCTATTGAATACAAAAAGACAACAGAAGTGGAAGAGGAACGTCCACCCTCAGCCTCAGCCTCACCCTCTCCACCTCCACCTTCTGAACCTGTGAAAGTGGACGCACCACCAGTACAACCACCACCTGATTTGTTGAATTTGGAGGATCCTGTTCCTGCTGCTGCAGAGTTGGAAGAGAAGAATGCATTGGCTTTAGCCATTGTCCCCGTTGCTGTTGAGCAACAACCTTCTGCTGCTTCAAATCAAGCAAATGGAACTACAGGATGGGAATTGGCACTTGTTACTGCTCCTAGTTCAAACGAGACTGCCACTGCAGCTAGCAAACTGGCTGGAGGTTTGGACAAGCTTACACTAGACAGCCTATACGATGATGCACTCAGAAGAAACAACCAAAATGTCAGCTATAATCCATGGGAGCCAGCACCAGGGGGAAACATGATGCAACCGACAATGCACGATCCGTTTTTTGCCTCTAATACAGTTGCCGCTCCACCTTCTGTTCAGATGGCTGCCATGTCCAACCAACAGCAAACTTTCATGTTTCAACATCAACAACAACAACAAATGATGATGCCCCCCCAACAACAATCTGTAAATCCTTTTGGAAATCCTTATGGAGCCGCCGCTGTCCATCCCTATGGCTCAGGTATGCCTGTTCAATCATACAATCCATATACAGGTCTCATCTAG 1647 0.4481 MSGGTQKSLRKALGALKDTTTVSLAKVNSDYKELDIAIVRATNHVERPAKEKHIRAIFSAISATRPRADVAYCIHALARRLSKTHNWAVALKTLIVIHRALREVDPTFHEELINYGRSRSHMLNMAHFKDDSSPNAWDYSAWVRTYALFLEERLECFRVLKYDIEADRPRTKDLDTAELLEQLPALQQLLNRVIGCQPHRAAVNNFVIQLALSMVASESIKIYQAISDGTVNMVDKFFEMQRHDALKALDIYRRVGHQAERLSEFYEICRNLDIGRGEKFIKVEQPPSSFLQAMEEYVKDAPQGPIVHKDLAIENKEVLAIEYKKTTEVEEERPPSASASPSPPPPSEPVKVDAPPVQPPPDLLNLEDPVPAAAELEEKNALALAIVPVAVEQQPSAASNQANGTTGWELALVTAPSSNETATAASKLAGGLDKLTLDSLYDDALRRNNQNVSYNPWEPAPGGNMMQPTMHDPFFASNTVAAPPSVQMAAMSNQQQTFMFQHQQQQQMMMPPQQQSVNPFGNPYGAAAVHPYGSGMPVQSYNPYTGLI 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01040 548 MobiDBLite consensus disorder prediction 337 364 - -
Gma17g01040 548 CDD ANTH_N 34 157 - -
Gma17g01040 548 Gene3D - 7 164 IPR008942 -
Gma17g01040 548 SMART enth_2 32 164 IPR013809 -
Gma17g01040 548 PANTHER OS06G0175500 PROTEIN 1 527 - -
Gma17g01040 548 ProSiteProfiles ENTH domain profile. 26 164 IPR013809 -
Gma17g01040 548 SUPERFAMILY GAT-like domain 169 300 - -
Gma17g01040 548 Pfam ANTH domain 33 300 IPR011417 GO:0005543
Gma17g01040 548 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 527 IPR045192 GO:0048268|GO:0072583
Gma17g01040 548 SUPERFAMILY ENTH/VHS domain 33 165 IPR008942 -
Gma17g01040 548 MobiDBLite consensus disorder prediction 325 364 - -
Gma17g01040 548 Gene3D ANTH domain 165 314 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01040 Gma-Chr17 8863381 8868186 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01040 K20043 - gmx:100800909 1021.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01040 17 8863381 8868186 Gma17g01040 17 8863381 8868186 ECH
Gma17g01040 17 8863381 8868186 Gma13g01416 13 28930513 28937183 GST
Gma17g01040 17 8863381 8868186 Gma06g02022 06 29143261 29156262 PCT
Gma06g02022 06 29143261 29156262 Gma17g01040 17 8863381 8868186 PCT