Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02022 ATGAAGAAGGCCTTTAGATTGACAAAAGTCAGTGGTGATCACAAGGGACTAGATGCGGCAATTGTTAAGGCAACAGGTTACGAGCATTTATTGCCAAAGGAAAAGCACATTCGTACCATTTTTCAATCACTTTCGCCATCAAAACCTCGTAGTGAGGTCGTTTACTGTATACACGGTCTCACCACGCGTTTTAGCCAAACTAATAATTGGGCTGTTGCTATGAAAACACTTATAATCATACATCGTGCCATAAGGGAACTTGACACCTCAATTTTGGAAGAACTTGTCAATTATAGCCAAGTAAAAGGTTGCATGATTGATCTCTCATACTTTCATGATAAATCAATTCCTAATGTACCAGATTATTCTATTTGGATTCGTAATTATGCCCTTTACCTTGAAGAACGCCTACAATGTTTCACCGTAATGAACTATGATGTGGCAACAAATACCTCGAAATATTCCCAAAAGCTTGATACCCAGGACTTGTTGGAGCAATTGCCAGTCTTACAAAATCTTCTCTCTCGTCTTCTAGATTGCAAGCCAAGGAGTACAACGGGATGTAATCGCTTAATTCAATTTGTCCTTTCACTCGTAGCCAGCGAAAGTGTCAAATTGTATGTTGCAATAACTATCAGAGTGGTCGAATTACTTGACAAGTTTTTCGAGATGCATCATAATGATGCTTGTAGTTCACTTCAAATTTATCAAAAATCAATGAGTCAGGCAGAAAGATTAACTGAGTTCTTTGAGACCTGCAAGGGCCTAGAATTTGGAAAGGGACAAAAATTCATCAATATTAAAATGCCTCCTGCTTCTTTTATTATTACCATGGAAGAATATATTAAGGAGGCTCCAAGCTCCTTAATGCTTGAATACAACATGGATGTCGATAGAGAAGAAGATACTACAACCAAAAATGTTGGTTCCGCTGATTTGTTGACTTTAGATAATGATGTTGTAGATAAGTCAACAGATCCTCATGTAGAAGATGGCATGGCTATACCACCACCACAAGCAGCTGAACTTATGGGTTTGTTTGACTTACTAACAGGAGCATCTGAATTTGATGAGAAATCCCTAACAACAACAATTGTCCCAACTGAAAAAAATTCTAAAGATGATGAGAATAGGACAAGTCCAATAACAGGTTGGGAGGTTGCTCTTTTTAGTGATTCTGAAAGATATGATGAGAATGTCATAGCTGAGATAAAGAGTAAAGAGAAGACTAGTCAAATGGAGGTGTCCAAACTCGACAGTCTATATGATGAGGTAATTGTTAACACACAACAAAGTGTAACTAACAATGCTACCCAAGTAACGTCCAATCCTTTTGACTATGAGGCTAGTCATAATGACCAATTTAGCATGGTAATGGCACCCTCAGCTTTGCAGAATGAGTTATGTGCACTTCCTCACATGCAATCCCCAATTTCAACTCAAATGGTAGGCACACCTCAACAACATTTGTTGCAACAACAAAATGAACCTTATACAATGAATAAAAAATCAACCAACCCTTTTGATTAA 1530 0.3778 MKKAFRLTKVSGDHKGLDAAIVKATGYEHLLPKEKHIRTIFQSLSPSKPRSEVVYCIHGLTTRFSQTNNWAVAMKTLIIIHRAIRELDTSILEELVNYSQVKGCMIDLSYFHDKSIPNVPDYSIWIRNYALYLEERLQCFTVMNYDVATNTSKYSQKLDTQDLLEQLPVLQNLLSRLLDCKPRSTTGCNRLIQFVLSLVASESVKLYVAITIRVVELLDKFFEMHHNDACSSLQIYQKSMSQAERLTEFFETCKGLEFGKGQKFINIKMPPASFIITMEEYIKEAPSSLMLEYNMDVDREEDTTTKNVGSADLLTLDNDVVDKSTDPHVEDGMAIPPPQAAELMGLFDLLTGASEFDEKSLTTTIVPTEKNSKDDENRTSPITGWEVALFSDSERYDENVIAEIKSKEKTSQMEVSKLDSLYDEVIVNTQQSVTNNATQVTSNPFDYEASHNDQFSMVMAPSALQNELCALPHMQSPISTQMVGTPQQHLLQQQNEPYTMNKKSTNPFD 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02022 509 MobiDBLite consensus disorder prediction 482 509 - -
Gma06g02022 509 SUPERFAMILY GAT-like domain 154 284 - -
Gma06g02022 509 Pfam ANTH domain 17 284 IPR011417 GO:0005543
Gma06g02022 509 SUPERFAMILY ENTH/VHS domain 16 147 IPR008942 -
Gma06g02022 509 Gene3D ANTH domain 159 286 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Gma06g02022 509 PANTHER CLATHRIN ASSEMBLY PROTEIN 7 508 - -
Gma06g02022 509 CDD ANTH_N 17 140 - -
Gma06g02022 509 SMART enth_2 15 147 IPR013809 -
Gma06g02022 509 Gene3D - 1 147 IPR008942 -
Gma06g02022 509 PANTHER CLATHRIN ASSEMBLY PROTEIN 7 508 IPR045192 GO:0048268|GO:0072583
Gma06g02022 509 ProSiteProfiles ENTH domain profile. 9 147 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02022 Gma-Chr6 29143261 29156262 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02022 K20043 - ncol:116250878 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02022 06 29143261 29156262 Gma06g02022 06 29143261 29156262 ECH
Gma17g01040 17 8863381 8868186 Gma06g02022 06 29143261 29156262 PCT
Gma13g01416 13 28930513 28937183 Gma06g02022 06 29143261 29156262 PCT
Gma06g02022 06 29143261 29156262 Gma17g01040 17 8863381 8868186 PCT
Gma06g02022 06 29143261 29156262 Gma13g01416 13 28930513 28937183 PCT