Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01416 ATGTCTGGTGGCACGCAGAAGAGTCTGAGAAAAGCACTTGGAGCCCTTAAGGATACTACAACAGTCTCGTTGGCTAAGGTCAACAGTGATTACAAGGAATTGGACATTGCTATAGTTAGGGCCACAAATCATGTTGAACGTCCAGCTAAGGAAAAACATATAAGAGCTATATTTTCAGCTATCTCAGCTACAAGACCCAGGGCTGATGTTGCCTATTGCATCCACGCACTTGCCAGGCGGTTATCAAAGACACATAACTGGGCAGTTGCATTGAAAACTTTAATTGTCATTCACCGTGCTCTAAGGGAAGTTGATCCTACATTTCATGAAGAACTCATCAATTATGGGAGAAGCAGAAGTCATATGCTCAACATGGCTCATTTTAAAGATGATTCCAGTCCAAATGCATGGGATTATTCTGCATGGGTTCGCACTTATGCCTTATTTTTGGAGGAAAGGCTGGAATGTTTCCGTGTGTTGAAGTATGACATTGAGGCAGACCGTCCTAGGACCAAAGATTTGGATACTGCAGAACTGTTAGAGCAGTTGCCAACTTTACAGCAACTTCTCCATCGAGTTATTGATTGCCAGCCACACGGGGCAGCTGTAAATAACTTTGTCATTCAGTTAGCACTCTCAATGGTTGCTTCAGAAAGCATTAAAATTTATCAAGCTATTAGTGATGGAACAGTCAATATGGTTGATAAGTTTTTTGAGATGCAACGCCATGATGCTCTGAAAGCTCTTGATATATACAGGAGGGTTGGGCACCAGGCTGAGAGACTGTCAGAGTTTTATGAAATATGTCGTAATCTTGACATTGGACGTGGAGAGAAGTTTATTAAAGTTGAGCAGCCCCCTTCGTCATTTCTGCAAGCCATGGAAGAGTATGTCAAAGATGCTCCCCAGGGACCAATAGTTCGAAAGGATCAGGCTATTGAGAACAAAGAAGTTTTGGCTATTGAATACAAAAAGACAACAGAAGTGGAAGAGGAATGTCCACCCTCACCCTCACCCTCACCCCCTCCACCTCCACCTTCTGAACCTGTGAAAGTGGAAGCACCACCAGTACAACCACCTCCTGATCTGTTGAATTTGGAGGATCCTGTTCCAGCTGCTGCAGAGTTGGAAGAGAAGAATGCATTGGCTTTAGCCATTGTTCCCGTTGCTGTTGAACAACAACCTTCTGCTGTTTCAAATCAAGCAAATGGAACTACAGGATGGGAATTGGCCCTTGTTACTGCTCCTAGTTCAAATGAGAGTGCCACAACAGCTAGCAAACTGGCTGGAGGTTTGGACAAGCTTACACTAGACAGCCTATACGATGATGCCCTCAGGAGAAACAACCAAAATGTCAGCTATAATCCATGGGAGCCAGCACCAGGTGGAAACATGATGCAACCGACAATGCACGATCCGTTTTTTGCCTCAAATACAGTTGCCGCTCCACCTTCTGTTCAGATGGCTTCCATGTCCAACCAACAGCAAGCTTTCATGTATCAACAGCAGCAGCAAATGATGATGGCTCCCCAACAACAATCTGTAAATCCTTTTGGAAATCCTTATGGAGCCACTGCTGTCCATCCCTATGGCTCAGgtgcattaatagtagcttga 1617 0.4397 MSGGTQKSLRKALGALKDTTTVSLAKVNSDYKELDIAIVRATNHVERPAKEKHIRAIFSAISATRPRADVAYCIHALARRLSKTHNWAVALKTLIVIHRALREVDPTFHEELINYGRSRSHMLNMAHFKDDSSPNAWDYSAWVRTYALFLEERLECFRVLKYDIEADRPRTKDLDTAELLEQLPTLQQLLHRVIDCQPHGAAVNNFVIQLALSMVASESIKIYQAISDGTVNMVDKFFEMQRHDALKALDIYRRVGHQAERLSEFYEICRNLDIGRGEKFIKVEQPPSSFLQAMEEYVKDAPQGPIVRKDQAIENKEVLAIEYKKTTEVEEECPPSPSPSPPPPPPSEPVKVEAPPVQPPPDLLNLEDPVPAAAELEEKNALALAIVPVAVEQQPSAVSNQANGTTGWELALVTAPSSNESATTASKLAGGLDKLTLDSLYDDALRRNNQNVSYNPWEPAPGGNMMQPTMHDPFFASNTVAAPPSVQMASMSNQQQAFMYQQQQQMMMAPQQQSVNPFGNPYGATAVHPYGSGALIVA 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01416 538 Pfam ANTH domain 33 300 IPR011417 GO:0005543
Gma13g01416 538 CDD ANTH_N 34 157 - -
Gma13g01416 538 SMART enth_2 32 164 IPR013809 -
Gma13g01416 538 MobiDBLite consensus disorder prediction 326 366 - -
Gma13g01416 538 ProSiteProfiles ENTH domain profile. 26 164 IPR013809 -
Gma13g01416 538 PANTHER OS06G0175500 PROTEIN 1 525 - -
Gma13g01416 538 Gene3D - 7 164 IPR008942 -
Gma13g01416 538 SUPERFAMILY ENTH/VHS domain 33 165 IPR008942 -
Gma13g01416 538 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 525 IPR045192 GO:0048268|GO:0072583
Gma13g01416 538 MobiDBLite consensus disorder prediction 334 366 - -
Gma13g01416 538 SUPERFAMILY GAT-like domain 169 300 - -
Gma13g01416 538 Gene3D ANTH domain 165 319 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01416 Gma-Chr13 28930513 28937183 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01416 K20043 - gmx:100815239 994.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01416 13 28930513 28937183 Gma13g01416 13 28930513 28937183 ECH
Gma17g01040 17 8863381 8868186 Gma13g01416 13 28930513 28937183 GST
Gma13g01416 13 28930513 28937183 Gma06g02022 06 29143261 29156262 PCT
Gma06g02022 06 29143261 29156262 Gma13g01416 13 28930513 28937183 PCT