Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00886 ATGTCGTCGACACCGCAGAGCTTAAAGCAGAGAGTCTTCAGATGCCTAACCAAACTCTCCGACCGCGACACGCAGTCTCTCGCCGCTGCGGAGCTCGAGTCAATCGCTCGAAACCTCGACGGAGCCACCTTGCCGATGTTCCTCTCGTGCATGTACTCCACCGACGACTCCGACAAGCCACCGGTGCGCAAGCAATGCGTTCAGCTCCTAGGGTTCCTCGCGGAGACGCACGGCAACATGCTCGCGCCGTACCTGCCAAAGATCCTCGGCAGCGTCGTGCGAAGGCTCCGCGATGCGGACTCGTCGGTCCGATCGGCGTGCGTGAATTCCATTGCGGCATTGTCACGCCACGTCAGCAAGCCGCCGCTGAATGCGTTTCTGAAGCCGTTGGCGGAGGCGCTTTTCACAGAGCAGGACCAGAACGCGCAGGCCAGCGCGGCGATGTGCCTCGCCGCCGCGATCGACGGAGCTCCGGATCCGGACCCGGCTAGGCTGGCGAAGCTCCTGCCGAGGTTCGAGAAGCTTCTAAAGCGCGACGGTTTCAAGGCGAAGCCCGCGCTGTTGACGCTTGTCGGAAGCGTCGTCGCCGCCGGCGGCGCTTCCGGCCACGTGCCGCTGAATAGTTTGGTTCCGTGCTTGGTGGAAGCGTTGAGCAGCGATGACTGGGCGACGCGTAAGGCCGCGGCGGAGACGCTCGTGGTGGTTGCCGACGTGGAGAGGGATTTCTTATCGGAGTTCAAGGCTGAGTGTGTTAGAGTTTTCGAGAATCGACGGTTTGATAAGGTGAAATTAGTTCGGGACGTTATGAATCAGATGTTGGAAGCGTGGAAGCAGATTCCTGATGTTTCGGATGAAGTTTCGCCACCTCCTAAATCGCAATCTTCTTCCAAAGAGAATGCAAGTGATGGGCGCTATCCCCAAGTCTCTCACAATTCATGTAGTCCTCGTTCAATGATGGCCAATTTGCGGAGGAAATCTACTCCTTTCAGCAGATTCAGTCCAGCAGATAGTTCTTCTGCTAGCAATGCTAAGAATTCGAGTGCTTCAAGTAGTAACAAGAGAAGATTGTTTGTTTCACGGAAATTAAACCATATGAATTGGGATGCTCCAATTGCTATGGCTGATCAGGGAGATCTTCAGGAGAGGGATGGAATTGTTTTGGATAGGAGCAAAATGGATAAAAGCAGAGTTTCAAAGTCAGAAATGAAACGGGTACTGCTAACTAAAAGTTCTGAGGATAAAATGCAAAAGTATGGTGGGTCCAAAGCTGGATCTCGTGTGGTTCCATATCATGAAGATGAGAGTCAAGACTCAGTTCCTGTCAGTATTGTCTCTAAAGATCTCCAAAGGAATGACAAAGAGAGTGAAGATTTATCGCTGATCCGTGATCAGTTACATCAGATTGAGAAGCAGCAGTCAAGTCTACTCGATCTTCTACAGAAATTCATGGGAAGCTCACAAAATGGAATGCGTTCTTTAGAGACTCGTGTGCATGGCCTTGAGTTGGCATTGGATGAGATCTCTTATGATTTGGCTATATCAAGTGGAAGGATGACTAAATCTGATGCTCAGGGTAACGCATGTTGCATGCTACCTGGAGCAGAATTTTTGAGCTCCAAATTCCGGAGGAAAACACATGGCCGGGATTCAATCGTGCGATTCTCTAGATCAGGTGGCACCCCATCACTTGCTGCCATGAACTACCCACCCAATAGGAATGCTGAAACTAAGTTGACAAACCACAGATTTAGGCCTGACGGAGGCTTCATCACTAATCCGCTTGCAGAGATTCATACGAATTCGAGGAATTTTGCGACATTGGAGATAGCTTAA 1833 0.5123 MSSTPQSLKQRVFRCLTKLSDRDTQSLAAAELESIARNLDGATLPMFLSCMYSTDDSDKPPVRKQCVQLLGFLAETHGNMLAPYLPKILGSVVRRLRDADSSVRSACVNSIAALSRHVSKPPLNAFLKPLAEALFTEQDQNAQASAAMCLAAAIDGAPDPDPARLAKLLPRFEKLLKRDGFKAKPALLTLVGSVVAAGGASGHVPLNSLVPCLVEALSSDDWATRKAAAETLVVVADVERDFLSEFKAECVRVFENRRFDKVKLVRDVMNQMLEAWKQIPDVSDEVSPPPKSQSSSKENASDGRYPQVSHNSCSPRSMMANLRRKSTPFSRFSPADSSSASNAKNSSASSSNKRRLFVSRKLNHMNWDAPIAMADQGDLQERDGIVLDRSKMDKSRVSKSEMKRVLLTKSSEDKMQKYGGSKAGSRVVPYHEDESQDSVPVSIVSKDLQRNDKESEDLSLIRDQLHQIEKQQSSLLDLLQKFMGSSQNGMRSLETRVHGLELALDEISYDLAISSGRMTKSDAQGNACCMLPGAEFLSSKFRRKTHGRDSIVRFSRSGGTPSLAAMNYPPNRNAETKLTNHRFRPDGGFITNPLAEIHTNSRNFATLEIA 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00886 610 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 5 605 IPR033337 GO:0005874|GO:0008017
Gma17g00886 610 Coils Coil 451 471 - -
Gma17g00886 610 MobiDBLite consensus disorder prediction 415 439 - -
Gma17g00886 610 MobiDBLite consensus disorder prediction 280 353 - -
Gma17g00886 610 Gene3D - 3 348 IPR011989 -
Gma17g00886 610 SUPERFAMILY ARM repeat 8 271 IPR016024 -
Gma17g00886 610 Pfam HEAT repeat 209 237 IPR000357 GO:0005515
Gma17g00886 610 PANTHER TORTIFOLIA1-LIKE PROTEIN 3 5 605 - -
Gma17g00886 610 MobiDBLite consensus disorder prediction 287 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00886 Gma-Chr17 7507007 7510320 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00886 - - gmx:100796857 1105.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00886 17 7507007 7510320 Gma17g00886 17 7507007 7510320 ECH
Gma17g00886 17 7507007 7510320 Gma05g00314 05 2898767 2902060 GST
Gma17g00886 17 7507007 7510320 Gma04g01719 04 46473954 46476720 PCT
Gma17g00886 17 7507007 7510320 Gma06g01676 06 16753519 16758990 PCT
Gma04g01719 04 46473954 46476720 Gma17g00886 17 7507007 7510320 PCT
Gma06g01676 06 16753519 16758990 Gma17g00886 17 7507007 7510320 PCT