Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01719 ATGCCTCGCGCCACAACAACCCAATCGCAGAACATAAAGCAGAGGGTACTCACGTGCCTAACAAAGCTCTCAGATCGCGACACACAAGTCGCAGGAGCCAACGAGCTCGAGTCCATCGCGCGCACCCTGGACCCGCACTCTGTTCCAGTCTTCCTCTCGTGCATCCACTCCACCGACGCCTCCGACAAAACCCCCGTTCGCAAGCAATGCGTGCACCTCGTGGCCACGCTCTCCCACGCCCACGGCGACGCGCTCTCCCCCTTCCTCTCCAAAATCCTCGCCTGCCTTGTCCGCCGCCTCCGCGACCCGGACTCCTCGATCCGGGCCGCGTGCGCCGACTCCGTCGGCGCACTCTCGGCGCGCGTCACGAGGCAACCGTTCGCCGCGGCGTTCCTGAAGCCGCTGGCGGAGGCGCTGTTCACTGAGCAGGACCCGAGCTCGCAGGCTGGAGCCGCTCTCTGTCTGGCCTCCGCGATTGAAGCGGCTCCGGATCCGGACCCGGCCAGGCTGGCCAGGTTGCTCCCGAGGCTCGAGAGGCTGATCAAGAGCAAGGTGTTTAGGGCCAAGCCAGCGCTGCTGGCGCTCGTTGGAAGCGTTGTCGAGGCGCGCGGCGCGACGAGCGGCGCCGCGTTGAGGAGTTTGGTTCCTTGTCTTCTGGAGGCGCTGGGGAGTGAGGACTGGGCCACTAGGAAGGGCGCGGCGGAGGCGTTGAAGAAGCTCGCGAGCGTGGAGAGGGACCTCTTGGCGGAGTTCAAGGGTGGATGCTTGAAAGTGTTTGAAGATCGCCGATTTGATAAGGTAAAGTTGGTTCGGGAGGTTATGAATCAGATGTTGGAGGCATGGAAGCATATTCCTGATGTTTCAGATGAGTTCTCTCCACCTCCTCAATTGCAGTTGTCTTCAAAAGAGAATGCAAGTGATGGGCGCTATCCTCCTGTCTCTCAAAATTCATGCAGTCCAGGTTCTGTAATGAGTAAATTGAGGAAGAAATCGAGCCCAGCTAGCAAATCAACTCCACCAGATAGATCTGCTGTTAGGAATGCAAAAAAGAGTGCATTAAGTGGCGATAGGATGGGTTCAGGTGTTTTGCAGAAACTGAACCATAACCATTGGGATGTTCGAATTGCTGTGTCAAATGTTCCTGATCGTGGTGAACGCCGGCAGAAGGATGAAGATGTTTTGGAAAGAAGCAAAAAGGATAAAAGCAGATTTTTTAAGCAGGAAACAAAACGGGCTCTATTTGATAAAAATTCTGATGACAAGATGCATAAATCTGGTGGGTCCAAAGCTGGATCTCGTGTGGTTCCTTGTTCTGAAGAGAGTCAAGACTCAGGTCCTGTCTGTAATGTAACTAAGGATCTCCATAGGAATGACAAAGAGAGTGAAGAATTATCTTTGATTCGTGCTCAATTAGTTCAAATTGAAAAGCAGCAGTCAAGTCTGCTTGATCTTGTACAGAAATTCATGGGGAACTCTGAAAATGGAATGCATACTTTAGAGACTCGTGTGCATGGCCTGGAGTTAGCATTGGATGAGATCTCTTATGATTTGGCTGTATCAAGTGGAAGGATATCTAAATCTGATGCTCCTAAGAATACTTGTTGCCTGCTACCTGGTGCTGAATTTTTAAGCACCAAATTCTGGAAGAAAACACAGGGCCGGTATTCATCGTACCGATTCTCTAGAACTGGTAGCACTCCATTACTAGCTTCCAGTCATTACAGAGCTAACAGGAATGCCAAATCTAATAGGTTGGCAAGCCATAGATTTAGGGTCCATGGTGATGGAAGCTTCATGACTAATCCTCTGGCAGAGATTAAAATTAATTCAAGGGAGATTTCAGGCTCTGCAAGATCAGAGCTAGCTTGA 1869 0.5169 MPRATTTQSQNIKQRVLTCLTKLSDRDTQVAGANELESIARTLDPHSVPVFLSCIHSTDASDKTPVRKQCVHLVATLSHAHGDALSPFLSKILACLVRRLRDPDSSIRAACADSVGALSARVTRQPFAAAFLKPLAEALFTEQDPSSQAGAALCLASAIEAAPDPDPARLARLLPRLERLIKSKVFRAKPALLALVGSVVEARGATSGAALRSLVPCLLEALGSEDWATRKGAAEALKKLASVERDLLAEFKGGCLKVFEDRRFDKVKLVREVMNQMLEAWKHIPDVSDEFSPPPQLQLSSKENASDGRYPPVSQNSCSPGSVMSKLRKKSSPASKSTPPDRSAVRNAKKSALSGDRMGSGVLQKLNHNHWDVRIAVSNVPDRGERRQKDEDVLERSKKDKSRFFKQETKRALFDKNSDDKMHKSGGSKAGSRVVPCSEESQDSGPVCNVTKDLHRNDKESEELSLIRAQLVQIEKQQSSLLDLVQKFMGNSENGMHTLETRVHGLELALDEISYDLAVSSGRISKSDAPKNTCCLLPGAEFLSTKFWKKTQGRYSSYRFSRTGSTPLLASSHYRANRNAKSNRLASHRFRVHGDGSFMTNPLAEIKINSREISGSARSELA 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01719 622 Coils Coil 457 477 - -
Gma04g01719 622 Pfam HEAT repeat 214 243 IPR000357 GO:0005515
Gma04g01719 622 PANTHER TORTIFOLIA1-LIKE PROTEIN 3 8 616 - -
Gma04g01719 622 MobiDBLite consensus disorder prediction 405 450 - -
Gma04g01719 622 Gene3D - 1 380 IPR011989 -
Gma04g01719 622 MobiDBLite consensus disorder prediction 293 344 - -
Gma04g01719 622 MobiDBLite consensus disorder prediction 405 427 - -
Gma04g01719 622 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 8 616 IPR033337 GO:0005874|GO:0008017
Gma04g01719 622 SMART TOG_3 35 273 IPR034085 -
Gma04g01719 622 SUPERFAMILY ARM repeat 8 280 IPR016024 -
Gma04g01719 622 MobiDBLite consensus disorder prediction 289 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01719 Gma-Chr4 46473954 46476720 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01719 - - gmx:100778310 1182.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01719 04 46473954 46476720 Gma04g01719 04 46473954 46476720 ECH
Gma04g01719 04 46473954 46476720 Gma06g01676 06 16753519 16758990 GST
Gma17g00886 17 7507007 7510320 Gma04g01719 04 46473954 46476720 PCT
Gma05g00314 05 2898767 2902060 Gma04g01719 04 46473954 46476720 PCT
Gma04g01719 04 46473954 46476720 Gma17g00886 17 7507007 7510320 PCT
Gma04g01719 04 46473954 46476720 Gma05g00314 05 2898767 2902060 PCT