Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01676 ATGCCTCACGCCAAAACCTCCCAATCGCAGCAGAACATAAAGCAGAGGGTACTCACGTGCCTAACGAAGCTCTCAGACCGCGACACACAAGCCGCGGGAGCCACCGAGCTCGAGTCCATCGCGCGTACCATAGACCCACACTCGGTTCCAGTGTTCCTCTCTTGCATCCACTCCACCGACTCCTCCGACAAAACCCCCGTCCGCAAGCAATGCGTGCACCTCGTCGCCACCCTCTCCCACGCGCACGGCGACGCGCTCTCGCCGTTTCTGTCCAAAATCATCGCCTGCCTCGTCCGCCGCCTCCGCGACCCGGACTCCTCGGTCCGGGCCGCGTGCGCCGACTCCGTCGGCGCACTCTCGGCGTGCGTCACGAGGCAGCCTTTCGCCGCCGCGTTCCTCAAGCCGCTCGCGGAGGCGCTTTTCACGGAGCAGGACCCGAGCTCGCAGGCTGGAGCCGCGCTATGTCTGGCCTCCGCGGTTGAAGCGGCTCCGGATCCGGACCCTGCCAGGCTTGCGAGGCTGCTTCCGAGGCTTGAGAGGCTGATCAAGAGCAAGGTGTTTAGGGCTAAGCCTGCACTGCTGGTGCTTGTTGGAAGCGTCGTCGAGGCGCGCGGCGCCTCTAGTGGCGTCGCGTTGAAGAATTTGGTTCCTTGCCTTGTGGAGGCTCTGGGGAGTGAGGACTGGGCCACCAGGAAGGGCGCGGCGGAGGCGTTGAAGAAGCTCGCGAGCGTGGAGAAGGACCTCTTGCCGGAGTTCAAGGGTGGATGCTTGAAGGTTTTCGAGAATCGGCGATTTGATAAGGTAAAGTTGGTTCGGGAGGTTATGAATGAGATGTTGGAGGCATGGAAGCAGATTCCTGATGTTTCGGATGAATTCTCTCCACCTCCTCAATCGCAGTTGTCTTCAAAGGAGAATGCAAGTGATGGGCGCTATCCTCCTGTCTCTCAAAATTCATGTAGTCCGGGTTCTGTAATGAGTAAATTGAGGAAGAAGTCGAGCCAAGTTAGCAAATCAACTCCACCAGATACATCTGCTGTTAGGAATGCTAAAAGGAGTGCATTAAGTGGCGATCGGATGAGTTCAGGTGTTCTGCAGAAACTGAACCATAACCATTGGGATGTTCGAATTGCTGTGTCAAATGTTTCTGATTGTGGTGAACGTCAGCAGAAGGATGAAGATGTTTTGGAAAGAAGAAAAAAGGATAGAAGCAGATTTTTTAAGCCGGAAACAAAACGGGCTCTATTCGATAAAAATTCTGATGACAAGATGCATAAATTTGGTGGGTCCAAAGCTGGATCTCGTGTGGTTCCTTGTTCTGAAGAGAGTCAAGACTCAGATCCTGTCTGTAATGTAACTAAGGATCTACATAGGAATGACAAAGAGAGTGAGGAATTATCTTTGATTCGTGCTCAATTAGTTCAAATTGAGAAGCAGCAGTCTAGTCTGCTTGATCTTGTACAGAAATTCATGGGGAGCTCTGAAAATGGAATGCGTACTTTAGAGACTCGTGTGCATGGCCTTGAGTTGGCATTGGATGAGATCTCTTATGATTTGGCTGTATCAAGTGGAAGGATAACTAAGTTTGATGCTCCTAAGCATACTTGTTGCATGCTGCCTGGTGCTGAATTTTTAAGCTCCAAATTCTGGAAGAAAACACAGGGCCGATATTCATCGTACCGGTTCTCTAGAACTGGTAGCACTCCATTACTACCTTCCAGTCATTACAGAGCTAACAGGAATGCCGAATCTAATAGGTCGACAAGCCACAGACTTGGGGTCCACGGTGATGGAGGCTTCACCACTAATCCTCTGGCAGAGATTAAAATTAATTCAAGGGAGATTTCAGGCTCTGCCAGATCAGAGCTAGCTTGA 1872 0.5182 MPHAKTSQSQQNIKQRVLTCLTKLSDRDTQAAGATELESIARTIDPHSVPVFLSCIHSTDSSDKTPVRKQCVHLVATLSHAHGDALSPFLSKIIACLVRRLRDPDSSVRAACADSVGALSACVTRQPFAAAFLKPLAEALFTEQDPSSQAGAALCLASAVEAAPDPDPARLARLLPRLERLIKSKVFRAKPALLVLVGSVVEARGASSGVALKNLVPCLVEALGSEDWATRKGAAEALKKLASVEKDLLPEFKGGCLKVFENRRFDKVKLVREVMNEMLEAWKQIPDVSDEFSPPPQSQLSSKENASDGRYPPVSQNSCSPGSVMSKLRKKSSQVSKSTPPDTSAVRNAKRSALSGDRMSSGVLQKLNHNHWDVRIAVSNVSDCGERQQKDEDVLERRKKDRSRFFKPETKRALFDKNSDDKMHKFGGSKAGSRVVPCSEESQDSDPVCNVTKDLHRNDKESEELSLIRAQLVQIEKQQSSLLDLVQKFMGSSENGMRTLETRVHGLELALDEISYDLAVSSGRITKFDAPKHTCCMLPGAEFLSSKFWKKTQGRYSSYRFSRTGSTPLLPSSHYRANRNAESNRSTSHRLGVHGDGGFTTNPLAEIKINSREISGSARSELA 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01676 623 MobiDBLite consensus disorder prediction 287 361 - -
Gma06g01676 623 MobiDBLite consensus disorder prediction 570 590 - -
Gma06g01676 623 Coils Coil 458 478 - -
Gma06g01676 623 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 8 617 IPR033337 GO:0005874|GO:0008017
Gma06g01676 623 SUPERFAMILY ARM repeat 8 378 IPR016024 -
Gma06g01676 623 MobiDBLite consensus disorder prediction 570 597 - -
Gma06g01676 623 Pfam HEAT repeat 215 244 IPR000357 GO:0005515
Gma06g01676 623 PANTHER TORTIFOLIA1-LIKE PROTEIN 3 8 617 - -
Gma06g01676 623 SMART TOG_3 36 274 IPR034085 -
Gma06g01676 623 MobiDBLite consensus disorder prediction 291 361 - -
Gma06g01676 623 MobiDBLite consensus disorder prediction 427 447 - -
Gma06g01676 623 Gene3D - 3 384 IPR011989 -
Gma06g01676 623 Pfam HEAT-like repeat 67 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01676 Gma-Chr6 16753519 16758990 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01676 - - gmx:100776414 1194.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01676 06 16753519 16758990 Gma06g01676 06 16753519 16758990 ECH
Gma04g01719 04 46473954 46476720 Gma06g01676 06 16753519 16758990 GST
Gma17g00886 17 7507007 7510320 Gma06g01676 06 16753519 16758990 PCT
Gma05g00314 05 2898767 2902060 Gma06g01676 06 16753519 16758990 PCT
Gma06g01676 06 16753519 16758990 Gma17g00886 17 7507007 7510320 PCT
Gma06g01676 06 16753519 16758990 Gma05g00314 05 2898767 2902060 PCT