Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00838 ATGAATTTTCTTCTACAAAAGGAGGGTTTGGTGAATTTCATTTCATTATTGGATTTGAGGTTGAAACTTGAAACTTTGAGACTCAGAGAGAGAGAGATGGCGCACACGGGCAGCAACAGTTCAATGCACCGGTCGAGTTCACGGCCTCAGCTGGATCTGAGCAAAGCAGAAATTCAAGGAAACTTCGAAGAGAAGTATCCAACCATTTTGCTACCCAATCAGTCTCATGATATATCTCACCTCGCTCTTGATATTGGAGGATCTCTTATAAAGTTGGTGTACTTTTCAAGACACCAAGACCAATCAACCTATGACAAAAGGGTGAAAAATGTGAAGAATCGACTGGGATTTCCACCCAATGGTAACAGGAGAAGCTATCCTATTCTTGGTGGAAGGCTTCATTTTGTGAAGTTTGAAACTAGCAAGATTAACGAGTGCCTAGACTTCATTAGCTCAAAGCAGCTTCACTCTGCTGGTGGAGGGGAATCACGTTATTCTGATGCCAGGACTGATTCAAATGCCATAATTAAGGCTACTGGTGGTGGGGCACACAAATTTGCTGACCTTTTCAAAGAAAGACTCGGACTGAGTCTTGACAAAGAAGATGAAATGAGCTGTCTTGTAGCAGGAGCAAATTTCTTGCTGAAGGCAATTCGTCATGAAGCTTTTACACACATGGAGGGCCAGAAAGAGTTTGTTCAAATTGACACTAACGACTTGTTTCCTTATCTTCTAGTTAATATTGGATCTGGTGTTAGTATGATCAAGGTTGATGGGGACGGAAAATATGAGAGGGTCAGTGGGACTAATGTTGGTGGTGGTACTTATTGGGGCTTGGGAAGGCTGTTAACAAAGTGTGAGAGCTTTGATGAATTACTTGAGCTGAGTCAGAAAGGAGATAATAGTAATACTGACATGCTTGTTGGGGACATTTATGGTGGCATGGACTATTCTAAGATTGGCCTATCGGCTTCTACCATTGCTTCAAGTTTTGGCAAGGCTACCTCAGAAAAAAAGGGACTTGAAGATTACAGACCTGAAGATATATCGCTCTCTCTTCTACGAATGATTTCATACAATATTGCCCAGATAGCCTACTTAAATGCATTGCGGTTTGGGTTGAAGCGTATCTTTTTTGGAGGATTTTTTATAAGGGGTCATGCCTATACCATGGATGCTATTTCTTTTGCAATTCATTTCTGGTCTAATGGGGCTGCACAAGCAATGTTCTTGCGACATGAAGGATTTCTTGGAGCATTAGGTGCATTTATGAGTTATGAAAAGCATGGTTTAGATGACCTAATGGTGCATCAGTTAGTTGAAAGATTCCCAATGGGTGCTCCATATACAGGAGGCAAGATTCATGGCCCCCCACTTAGGGATTTGAATGAGAAGATTTCATGGATGGAGAAGTTTCTACAAAAGGTAACTGAGATCACTGCCCCTGTGCCGATGGCTCCTCCTGGAACTACTGGACTCGGGGGTTTTGAAGTTCCTTTGTCAAAAGGAAGTACTCTGCGATCTGATGCTAGTGCTCTAAACGTTGGTGTCCTACATCTAGTACCCACTTTAGAGGTGTTTCCATTGCTAGCAGACCTGAAAATGTATGAGCCTAATACTATTGATCTCTCAGATCACAGTGAATTAGAGTATTGGTTCAAGATTTTGTCAGAGCACTTGCCAGATCTTGTGGACAAGGCTGTAGCAAGTGAAGGTGGGACTGATGATGCCAAGAGAAGGGGTGATGCTTTTGCTCGTGCATTTTCTGCCCACCTGGCTAGGTTAATGGAGGAGCCTGCTGCATACGGGAAGTTAGGTCTGGCCAGACTACTGGAAATGAGGGAAGAATGCTTGAGGGAATTTCATTTTTTTGATGCGTATATAAGTATAAAGCAGAGGGAAAATGAGGCATCACTTGCTGTCCTACCTGATTTGTTGATGGAGCTTGATAGCATGGATGAGGAAACAAGACTACTTACTCTCATTGAAGGTGTTCTTGCTGCAAACATTTTTGATTGGGGATCTCGTGCATGTGTGGATCTCTATCATAAAGGAACTATTATTGAAATTTACAGAATGAGTCGCAACAAAATGCAGAGACCTTGGCGTGTGGATGATTTTGATGCCTTTAAACAAAGAATGTTAGGAACTGGGGACAAGAAACCACCCCCACATAGAAGAGCTTTACTTTTTGTGGACAATGCAGGTGCTGACATTGTTCTTGGGATGCTTCCCCTGGCACGAGAGCTCCTCCGCCGTGGAACTGAAGTGGTCCTGGTTGCAAACTCCCTTCCTGCTTTGAATGATGTGACCGCAATGGAGCTCCCTGACATTGTTGCTGAGGCTGCCAAGCACTGTGACATTCTTAGGCGAGCTGCTGAATCTGGTGGCTTGCTGGTGGATGCAATGACTAATACCTTGGACAGTCCTAGAGAAAATTCTTCTTCTGTTCCCTTGATGGTTGTTGAGAATGGGTGTGGTAGTCCATGTATAGACTTGAGACAGGTCAGCTCTGAGCTGGCTGCTGCTGCAAAAGATGCTGATTTGATAATTTTGGAAGGGATGGGTAGAGCTCTTCATACCAACCTCAATGCCCGATTTCAGTGTGATGCTTTGAAGCTTGCAATGGTGAAAAATCAAAGGTTGGCTGAAAAGTTGATTAAAGGGAACATTTACGACTGTATATGCAAATACGAACCTGCTAACTGA 2709 0.4326 MNFLLQKEGLVNFISLLDLRLKLETLRLREREMAHTGSNSSMHRSSSRPQLDLSKAEIQGNFEEKYPTILLPNQSHDISHLALDIGGSLIKLVYFSRHQDQSTYDKRVKNVKNRLGFPPNGNRRSYPILGGRLHFVKFETSKINECLDFISSKQLHSAGGGESRYSDARTDSNAIIKATGGGAHKFADLFKERLGLSLDKEDEMSCLVAGANFLLKAIRHEAFTHMEGQKEFVQIDTNDLFPYLLVNIGSGVSMIKVDGDGKYERVSGTNVGGGTYWGLGRLLTKCESFDELLELSQKGDNSNTDMLVGDIYGGMDYSKIGLSASTIASSFGKATSEKKGLEDYRPEDISLSLLRMISYNIAQIAYLNALRFGLKRIFFGGFFIRGHAYTMDAISFAIHFWSNGAAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLRDLNEKISWMEKFLQKVTEITAPVPMAPPGTTGLGGFEVPLSKGSTLRSDASALNVGVLHLVPTLEVFPLLADLKMYEPNTIDLSDHSELEYWFKILSEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLARLMEEPAAYGKLGLARLLEMREECLREFHFFDAYISIKQRENEASLAVLPDLLMELDSMDEETRLLTLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMQRPWRVDDFDAFKQRMLGTGDKKPPPHRRALLFVDNAGADIVLGMLPLARELLRRGTEVVLVANSLPALNDVTAMELPDIVAEAAKHCDILRRAAESGGLLVDAMTNTLDSPRENSSSVPLMVVENGCGSPCIDLRQVSSELAAAAKDADLIILEGMGRALHTNLNARFQCDALKLAMVKNQRLAEKLIKGNIYDCICKYEPAN 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00838 902 Pfam Damage-control phosphatase ARMT1-like domain 609 888 IPR002791 -
Gma17g00838 902 PANTHER PANTOTHENATE KINASE 2 16 824 - -
Gma17g00838 902 TIGRFAM panK_eukar: pantothenate kinase 80 425 IPR004567 GO:0004594|GO:0005524|GO:0015937
Gma17g00838 902 SUPERFAMILY Actin-like ATPase domain 193 426 IPR043129 -
Gma17g00838 902 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 703 900 - -
Gma17g00838 902 Gene3D - 73 234 - -
Gma17g00838 902 Gene3D - 305 415 - -
Gma17g00838 902 PANTHER PANTOTHENATE KINASE 16 824 IPR004567 GO:0004594|GO:0005524|GO:0015937
Gma17g00838 902 Coils Coil 901 902 - -
Gma17g00838 902 Gene3D - 539 623 IPR035073 -
Gma17g00838 902 Pfam Fumble 80 424 IPR004567 GO:0004594|GO:0005524|GO:0015937
Gma17g00838 902 SUPERFAMILY AF1104-like 517 900 IPR036075 -
Gma17g00838 902 SUPERFAMILY Actin-like ATPase domain 78 221 IPR043129 -
Gma17g00838 902 PIRSF PanK_long 33 902 IPR015844 GO:0004594|GO:0015937
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00838 Gma-Chr17 7075979 7087498 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00838 K24265 K09680 gmx:100783082 1741.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00360 05 3374019 3377819 Gma17g00838 17 7075979 7087498 ECH
Gma17g00838 17 7075979 7087498 Gma17g00838 17 7075979 7087498 ECH
Gma17g00838 17 7075979 7087498 Gma05g00360 05 3374019 3377819 GST
Gma17g00838 17 7075979 7087498 Gma06g01622 06 15961870 15975942 PCT
Gma06g01622 06 15961870 15975942 Gma17g00838 17 7075979 7087498 PCT