Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00360 ATGCACCGGTCCAGTTCACGGCCTCAGCTGGATCTCAGCAAAGCAGAAATTCAAGGAAACTTCGAAGAGAAGTATCCAACCATTTTGTTACCCAATCAGTCTCATGATATATCTCACCTCGCTCTTGACATTGGAGGATCTCTTATAAAGTTGGTGTACTTTTCAAGACACCGAGACCAATCAACCTATGATAAAAGGATGATAAATGTGAATAATCGACTGGGATTTCCGCCCAATGGTAACAGGAGAAGCTATCCTATTCTTGGTGGAAGGCTTCATTTTGTGAAGTTCGAAACTAGCAAGATTAACGAGTGCCTAGACTTCATTAACTCAAAGCAGCTTCACTGTGGTGAAGGGGAATCACGTTATTCTGATGCCACGACTGATTCAAATGCCATAATTAAGGCTACTGGTGGTGGAGCACACAAATTTGCTGACCTTTTCAAAGAAAGACTCGGACTTAGTCTTGACAAAGAAGATGAAATGAACTGCCTTGTAGCAGGAGCAAATTTCTTGCTGAAGGCAATTCGTCGTGAAGCTTTTACACACATGGAGGGTCAGAAAGAGTTTGTTCAAATTGACACTAATGATTTGTTTCCTTATCTTCTAGTTAATATTGGATCTGGTGTTAGTATGATCAAGgttgatggggatggaaaatatgagagggtcaatgggactaatgttggtggtggtacttattggggATTGGGAAGGCTGTTAACAAAGTGTGAGAGTTCCAACTTTGATGAATTACTTGAGCTGAGTCAGAAAGGAGATAATAGTAATACTGACATGCTTGTTGGGGACATTTATGGTGGCATGGACTATTCTAAGACTGGCCTATCGGCTTCTACCATTGCTTCAAGTTTTGGTAAGGTTACCTCAGAAAAAAAGGGACTTGATGATTACAGACCTGAAGATATATCACTCTCTCTTCTCCGAATGATTTCATACAATATTGCCCAGtttcaggtgaaaagatga 987 0.3718 MHRSSSRPQLDLSKAEIQGNFEEKYPTILLPNQSHDISHLALDIGGSLIKLVYFSRHRDQSTYDKRMINVNNRLGFPPNGNRRSYPILGGRLHFVKFETSKINECLDFINSKQLHCGEGESRYSDATTDSNAIIKATGGGAHKFADLFKERLGLSLDKEDEMNCLVAGANFLLKAIRREAFTHMEGQKEFVQIDTNDLFPYLLVNIGSGVSMIKVDGDGKYERVNGTNVGGGTYWGLGRLLTKCESSNFDELLELSQKGDNSNTDMLVGDIYGGMDYSKTGLSASTIASSFGKVTSEKKGLDDYRPEDISLSLLRMISYNIAQFQVKR 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00360 328 TIGRFAM panK_eukar: pantothenate kinase 39 324 IPR004567 GO:0004594|GO:0005524|GO:0015937
Gma05g00360 328 SUPERFAMILY Actin-like ATPase domain 151 324 IPR043129 -
Gma05g00360 328 PANTHER PANTOTHENATE KINASE 2 1 324 - -
Gma05g00360 328 SUPERFAMILY Actin-like ATPase domain 37 178 IPR043129 -
Gma05g00360 328 Gene3D - 32 192 - -
Gma05g00360 328 Gene3D - 260 300 - -
Gma05g00360 328 PANTHER PANTOTHENATE KINASE 1 324 IPR004567 GO:0004594|GO:0005524|GO:0015937
Gma05g00360 328 Pfam Fumble 39 324 IPR004567 GO:0004594|GO:0005524|GO:0015937
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00360 Gma-Chr5 3374019 3377819 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00360 K24265 K09680 gmx:100783082 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00360 05 3374019 3377819 Gma17g00838 17 7075979 7087498 ECH
Gma05g00360 05 3374019 3377819 Gma05g00360 05 3374019 3377819 ECH
Gma17g00838 17 7075979 7087498 Gma05g00360 05 3374019 3377819 GST
Gma05g00360 05 3374019 3377819 Gma06g01622 06 15961870 15975942 PCT
Gma06g01622 06 15961870 15975942 Gma05g00360 05 3374019 3377819 PCT