Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01622 ATGGCTGGTTCTCTTCAAAACCAACGACAACAACTTCTTGGAATTATCGAAGAAGAAGAACAAGAGAAATTGCAGAAACAGAAAGAAGAGACTGAGGGGAACAACAACAATAATAACAATAACAAGAGTGACATGGCTCCTACGGCAGGGAATTCGATCCACAGGTCGGGTTCGAGGCCGCAACTTGATGTGAGCAAAGCTGAGATTCAAGGGAATGTGGAGGAGAAGTATCCCACCATTTTGTTGCCTAATCAATCTGATGATTTGTCTCATCTTGCTCTTGACATTGGAGGATCTCTGATAAAGTTGGTGTACTTTTCAAGACATGAAGATCAATCATGGGATGATAAAAGGAAGAGAAGCATGAAGGAGCCATTGGGGCTTTCTAATGGTAACAGGAGAAGCTTCCCTATTCTTGGTGGAAGGCTTCACTTTGTGAAGTTTGAAACGAGAAAGATTAATGAGTGCTTGGATTTCATTCATTCTAAGCAGCTTCACTGTGGTGGGTTGGAGTCACATTATTCTGATGGTGTGACTGATCAGAATGGCATAATTAAGGCTACTGGAGGTGGAGCATATAAGTATGCTGACCTTTTCAAAGAAAGACTTGGGGTTAGTCTGGACAAAGAAGATGAAATGGATTGTCTTGTGGCAGGAGCAAATTTCTTGCTTAAGGCAATTCGTCATGAAGCTTTCACACACATGGAGGGCCACAAAGAGTTTGTTCAAATTGAACCTAATGATTTATTCCCATATCTTCTGGTTAATATTGGATCTGGTGTTAGTATGATCAAGGTTGATGGGGATGGTAAATTTGAGAGGGTTAGTGGGACAAATGTTGGTGGTGGGACTTATTGGGGCTTGGGAAGACTGTTAACAAAGTGCAAGAGTTTTGATGAGTTGCTTGAGCTGAGTCAGAAAGGAGATAATAGAACTATGGACATGCTAGTTGGGGACATTTACGGGGGTTTGGACTATTCTAAGATTGGCCTATCAGCTTCCACTATTGCTTCAAGTTTCGGAAAAACGATATCAGAAAAAAAGGAACTTGAAGAGTACAGACCTGAAGACATATCACTCTCTCTTCTACGGATGATTTCATACAATATTGGCCAGATAGCTTACTTGAATGCGTTGCGATTTCGGTTGAAGCGAATCTTTTTTGGAGGATTTTTTATAAGGGGTCATGCCTATACCATGGACACTATTTCTTTTGCTGTACATTTCTGGTCTAATGGGGAAGCACAAGCAATGTTCTTGCGTCATGAAGGATTTCTGGGAGCTTTAGGTGCATTTATGAGTTATGAGAAGCATGGTTTAGATGACCTCATGGTGCATCAGTTGGTGGAAAGGTTTCCAATGGGTGCTCCATATACAGGAGGCAAGATTCATGGCCCTCCACTTGGAGATTTAAATGAGAAGATTTCGTGGATGGAGAAGTTTTTGCAGAAGGGAACTGAGATTACTGCACCTGTGCCAATGACTCCACTTGCTGGAACTACTGGGCTTGGGGGTTTTGAAGTTCCTTTGTCAAAAGGAAGTACTCTGCGATCTGATGCAAGTGCTCTAAATGTTGGTGTTCTCCATCTAGTACCAACGTTGGAGGTGTTTCCATTACTAGCAGACCCAAAATTGTATGATCCCAATACGATTGATCTCTCAGATCATAGTGAATTAGAATATTGGCTCACCATTTTATCAGAGCACTTACCAGATCTTGTGGACAAGGCTGTAGCAAGTGAAGGTGGAACTGATGATGCCAAAAGAAGGGGTGATGCTTTTGCTCGTGCATTTTCAGCTCACTTGGCAAGGTTGATGGAGGAGCCTTCTGCATATGGGAAGTTAGGCCTTGCCAATCTCTTGGAAATGAGGGAAGAGTGCTTGAGAGAATTTCAGTTTGTTGATGCCTATAGAAGTATAAAGCAGAGGGAAAATGAGGCATCGCTTGCTGTTTTACCTGACTTGCTGGTGGAACTTGATAGTATGGACGAGGAATCAAGGCTGCTTACACTAATTGAAGGTGTTCTTGCAGCAAATATTTTTGACTGGGGATCTCGTGCATGTGTGGATCTCTATCATAAAGGAACTATTATTGAAATTTATAGAATGAGCCGCAATAAAATGTGCAGACCTTGGCGGGTGGATGATTTTGATGACTTTAAAGAGAGAATGTTAGGGACCGGGGACAAGAAAATGCCCCATCATAAGAGGGCTTTACTTTTCGTAGATAACTCAGGTGCTGACATTGTTCTAGGGATGCTTCCACTGGCTAGGGAGCTCCTCCGCCGTGGAACTGAAGTAGTTCTGGTTGCAAACTCACTTCCTGCCTTAAATGATGTCACTGCAATGGAGCTTCCTGATATTGTAGCTGAAGCTGCCAAGCATTGTGACATTCTTAGGAGAGCTGCTGAAGCTGGAGGCTTGCTTGTGGATGCAATGATTAATACTTCAGACAGCTCTAAGGAAAATCCTTCTTCAGTCCCCTTGATGGTTGTTGAGAACGGGTGTGGTAGTCCATGTATAGACTTAAGACAGGTCAGCTCTGAGCTAGCTGCTGCTGCAAAAGATGCTGATCTGATAATTTTGGAAGGGATGGGGAGAGCACTTCATACTAACCTAAATGCTCGGTTTAAGCGTGATGCTTTAAAGCTTGCAATGGTGAAAAACCAGAGATTGGCTGAAAAATTGGTTAAAGGGAACATATACGACTGTATTTGCAAATACGAGCCTGCAAGTTGA 2739 0.4261 MAGSLQNQRQQLLGIIEEEEQEKLQKQKEETEGNNNNNNNNKSDMAPTAGNSIHRSGSRPQLDVSKAEIQGNVEEKYPTILLPNQSDDLSHLALDIGGSLIKLVYFSRHEDQSWDDKRKRSMKEPLGLSNGNRRSFPILGGRLHFVKFETRKINECLDFIHSKQLHCGGLESHYSDGVTDQNGIIKATGGGAYKYADLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGHKEFVQIEPNDLFPYLLVNIGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQKGDNRTMDMLVGDIYGGLDYSKIGLSASTIASSFGKTISEKKELEEYRPEDISLSLLRMISYNIGQIAYLNALRFRLKRIFFGGFFIRGHAYTMDTISFAVHFWSNGEAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKISWMEKFLQKGTEITAPVPMTPLAGTTGLGGFEVPLSKGSTLRSDASALNVGVLHLVPTLEVFPLLADPKLYDPNTIDLSDHSELEYWLTILSEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLARLMEEPSAYGKLGLANLLEMREECLREFQFVDAYRSIKQRENEASLAVLPDLLVELDSMDEESRLLTLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMCRPWRVDDFDDFKERMLGTGDKKMPHHKRALLFVDNSGADIVLGMLPLARELLRRGTEVVLVANSLPALNDVTAMELPDIVAEAAKHCDILRRAAEAGGLLVDAMINTSDSSKENPSSVPLMVVENGCGSPCIDLRQVSSELAAAAKDADLIILEGMGRALHTNLNARFKRDALKLAMVKNQRLAEKLVKGNIYDCICKYEPAS 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01622 912 Gene3D - 83 243 - -
Gma06g01622 912 SUPERFAMILY Actin-like ATPase domain 202 435 IPR043129 -
Gma06g01622 912 SUPERFAMILY AF1104-like 528 910 IPR036075 -
Gma06g01622 912 PIRSF PanK_long 45 912 IPR015844 GO:0004594|GO:0015937
Gma06g01622 912 Pfam Damage-control phosphatase ARMT1-like domain 619 898 IPR002791 -
Gma06g01622 912 Pfam Fumble 91 433 IPR004567 GO:0004594|GO:0005524|GO:0015937
Gma06g01622 912 Gene3D - 312 424 - -
Gma06g01622 912 PANTHER PANTOTHENATE KINASE 2 39 834 - -
Gma06g01622 912 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 713 910 - -
Gma06g01622 912 Coils Coil 2 41 - -
Gma06g01622 912 MobiDBLite consensus disorder prediction 1 63 - -
Gma06g01622 912 TIGRFAM panK_eukar: pantothenate kinase 91 434 IPR004567 GO:0004594|GO:0005524|GO:0015937
Gma06g01622 912 MobiDBLite consensus disorder prediction 15 30 - -
Gma06g01622 912 PANTHER PANTOTHENATE KINASE 39 834 IPR004567 GO:0004594|GO:0005524|GO:0015937
Gma06g01622 912 SUPERFAMILY Actin-like ATPase domain 90 230 IPR043129 -
Gma06g01622 912 MobiDBLite consensus disorder prediction 31 63 - -
Gma06g01622 912 Gene3D - 549 634 IPR035073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01622 Gma-Chr6 15961870 15975942 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01622 K24265 - gmx:100781580 1746.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01622 06 15961870 15975942 Gma06g01622 06 15961870 15975942 ECH
Gma17g00838 17 7075979 7087498 Gma06g01622 06 15961870 15975942 PCT
Gma05g00360 05 3374019 3377819 Gma06g01622 06 15961870 15975942 PCT
Gma06g01622 06 15961870 15975942 Gma17g00838 17 7075979 7087498 PCT
Gma06g01622 06 15961870 15975942 Gma05g00360 05 3374019 3377819 PCT