Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00819 ATGGACATGAAGGGATATTCAGTTTCCTGGACAAAACAACATCAGAAAGAGCTATTTTTTGCAGCTCATCACACAACAAGACAACACCAATGCATACAAGCAAATCATGATGCCACAGAAGAAACAAGCTCACAGCAACAAAATCAATATTCCCTGAAATTGGCTCTTTCTTCCACTTCCCAAAATACTATGCTACATGCTTTTGTTGCTTTGCTGCTACTTGTTACTTCAATTGGCACAGCATTCTCTCACCCCACCATTGCCTCCAATTCTTCTTCAACTTTGCCAGCAGCACTCTCTCACTTCCATGCTAATAACAACACATTGAGACCTTCTGCAGTGTTGCAAAAGTTGAGGAGAATCAGAGCTCATCTCAACAAGAGCAACAAGCCTGCTGTTAAAACAATTAAGAGTCCAGATGGGGATTTGATTGATTGTGTTTTGTCTCATCAGCAACCTGCTTTTGACCATCCTCAACTCAAAGGGCAAAGACCATTGGATCCACCAGAAAGGCCAAAGGGTCACACTCACACCAATGGAGAAACAGTCATAGAGAGCTTTCAGCTTTGGACTGATTCTGGTGAAGCATGCCCAGAAGGAACTGTTCCAATCAGAAGAACAACTGAACAAGATTTTCTACGAGCAAGCTCCGTTAGAAGATTTGGAAGAAAACCAAGAAATGTACGGAGGGACTCCACAGGCACTGGTCATGAGCATGCAGTTGTTTCTGTAAATGGAGATCAATACTATGGAGCAAAAGCAAGCATAAACGTGTGGACGCCTAGCGTAACCGATCCATACGAATTCAGTTTGTCACAGATATGGGTTATTGCTGGATCGTTTGGTAATGATCTGAATACCATAGAAGCTGGATGGCAGGTAAGTCCTGAGCTATATGGAGACAACTATCCTAGGTTCTTCACTTATTGGACAACGGATGCATATCAAGCAACAGGATGCTACAACTTACTATGTTCAGGATTTGTCCAAACCAACAACAGGATAGCAATAGGGGCTGCAATCTCACCAAGATCCATCTACAATGGCAGACAATTTGATATTGGATTAATGGTTTGGAAGGACCCAAAGCATGGACATTGGTGGCTGGAGTTTGGGTCGGGGCTTCTAGTTGGGTACTGGCCAGCATACTTGTTTAGTCACTTGAGAAACCATGCAAGCATGGTGCAATTTGGAGGGGAAATTGTGAATTCTCGTTCAAGGGGCTACCACACTGGCACTCAAATGGGTAGTGGCCATTTTTCAGGAGAAGGGTTTAGAAAAGCAGCATATTTTAGAAACTTACAAGTTGTTGATTGGGACAATAACTTGCTTCCTCTATCAAATATTCACCAGTTGGCTGACCATTCCAATTGCTATGACATAAGGATGGGATCAAACAGTGTTTGGGGAACTTACTTTTATTATGGAGGTCCTGGaaggaatgtgagatgcccatga 1458 0.4218 MDMKGYSVSWTKQHQKELFFAAHHTTRQHQCIQANHDATEETSSQQQNQYSLKLALSSTSQNTMLHAFVALLLLVTSIGTAFSHPTIASNSSSTLPAALSHFHANNNTLRPSAVLQKLRRIRAHLNKSNKPAVKTIKSPDGDLIDCVLSHQQPAFDHPQLKGQRPLDPPERPKGHTHTNGETVIESFQLWTDSGEACPEGTVPIRRTTEQDFLRASSVRRFGRKPRNVRRDSTGTGHEHAVVSVNGDQYYGAKASINVWTPSVTDPYEFSLSQIWVIAGSFGNDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPRSIYNGRQFDIGLMVWKDPKHGHWWLEFGSGLLVGYWPAYLFSHLRNHASMVQFGGEIVNSRSRGYHTGTQMGSGHFSGEGFRKAAYFRNLQVVDWDNNLLPLSNIHQLADHSNCYDIRMGSNSVWGTYFYYGGPGRNVRCP 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00819 485 Pfam Neprosin 268 478 IPR004314 -
Gma17g00819 485 Pfam Neprosin activation peptide 135 242 IPR025521 -
Gma17g00819 485 PANTHER CARBOXYL-TERMINAL PEPTIDASE 49 485 - -
Gma17g00819 485 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 49 485 - -
Gma17g00819 485 Gene3D - 262 372 - -
Gma17g00819 485 MobiDBLite consensus disorder prediction 154 178 - -
Gma17g00819 485 MobiDBLite consensus disorder prediction 163 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00819 Gma-Chr17 6892001 6895317 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00819 - - gmx:100820129 1018.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00380 05 3538804 3542342 Gma17g00819 17 6892001 6895317 ECH
Gma17g00819 17 6892001 6895317 Gma17g00819 17 6892001 6895317 ECH
Gma17g00819 17 6892001 6895317 Gma05g00380 05 3538804 3542342 GST
Gma17g00819 17 6892001 6895317 Gma04g01800 04 48038572 48048910 PCT
Gma17g00819 17 6892001 6895317 Gma06g01607 06 15660885 15666502 PCT
Gma04g01800 04 48038572 48048910 Gma17g00819 17 6892001 6895317 PCT
Gma06g01607 06 15660885 15666502 Gma17g00819 17 6892001 6895317 PCT