Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01800 ATGGCCAATGATCCATTTTTTGAAGCTCACCACAGAACAAGACAACAACAACACCAATGCATGATGATGATACAACAACCAAACAATGATGATGATGTTGTCCCAGAACACACATGTGCACAACAACAACAACAAGAGCAACAAAACCAATCTCCAAAATTGGCTGCTTCTTCCACTTCCCAAAATGCTACACCTGTGCTACCTGCTTTTGTTGCCTTGCTGCTCCTTGTTACTTCAATTGCCCCAGCAGCACTCTGCCACCCTTTGCAAGGTAGTAACCACACTTTTAGGCCAAATCATGAGTTGCTCAAGTTGAGGAGAGTCAGAGCACACTTGAAGAAAATCAACAAGCCTTCTGTCAAGACAATTCAGGCATCTTCCTTTTCTTTTTCTTTCTCTACAACAACCTATGGTGATTTGATAGATTGTGTTTTATCTCACCAACAACATGCTTTTGACCATCCTAAGCTTAGAGGCCACATAGTATTGGATCCACCAGAGAGACCAAAGGGGAACCACACCAATGGTGAAGCTGAAAGGGTAATTGAGAGCTTTCAGCTGTGGAGTGATTCTGGTGAAGCATGCCCAGAAGGAACTGTTCCAATCAGAAGAACTACAGAAGAGGATATTCTCAGAGCAAGTTCTATCCAAAGATTTGGAAGAAAACCAAGACCTGTACGGAGAGACTCTACTGGCAGTGGTCACGAGCATGCAGTAGTTTTTGTAAATGGGGATCAATATTATGGAGCAAAAGCTAGCATAAACGTGTGGGCACCCCGTGTAACTGATGAATTTGAATTCAGTTTGTCACAAATGTGGGTTATTGCTGGCTCCTTTGGTAAAGATCTCAACACCATAGAAGCTGGTTGGCAGGTAAGTCCACAACTATATGGAGACAACTATCCAAGGTTCTTCACTTATTGGACTACTGATGCATATCAAACAACTGGGTGCTACAACTTACTCTGTTCAGGCTTTATCCAAATCAACAATAGGATAGCAATAGGTGCAGCAATTTCGCCAAGATCCGCTTTCAACAGAAGACAATTTGATATTGGCTTAATGATTTGGAAGGATCCAAAGCATGGACACTGGTGGCTGGAATTCGGGTCAGGACTACTAGTTGGGTACTGGCCAGCAAACATGTTCAGTCACTTGAGGAACCATGCAAGCATGGTGCAATTTGGAGGAGAAATTGTGAACACTCGTTCAAGGGGTTACCACACTGACACCCAAATGGGGAGTGGCCATTTTGCTGAAGAAGGGTTTAGAAAATCAGCATATTTTAGAAACTTACAAGTGGTTGATTGGGACAATAGCTTGCTTCCTCTTAGAAATATTCACCTTTTGGCTGATCATTCCAACTGCTATAACATATGGCAGGGAACCAACAATGTTTGGGGGACTTACTTTTACTATGGAGGGCCTGGAAGGAATGTGAGATGCCCTTGA 1452 0.4298 MANDPFFEAHHRTRQQQHQCMMMIQQPNNDDDVVPEHTCAQQQQQEQQNQSPKLAASSTSQNATPVLPAFVALLLLVTSIAPAALCHPLQGSNHTFRPNHELLKLRRVRAHLKKINKPSVKTIQASSFSFSFSTTTYGDLIDCVLSHQQHAFDHPKLRGHIVLDPPERPKGNHTNGEAERVIESFQLWSDSGEACPEGTVPIRRTTEEDILRASSIQRFGRKPRPVRRDSTGSGHEHAVVFVNGDQYYGAKASINVWAPRVTDEFEFSLSQMWVIAGSFGKDLNTIEAGWQVSPQLYGDNYPRFFTYWTTDAYQTTGCYNLLCSGFIQINNRIAIGAAISPRSAFNRRQFDIGLMIWKDPKHGHWWLEFGSGLLVGYWPANMFSHLRNHASMVQFGGEIVNTRSRGYHTDTQMGSGHFAEEGFRKSAYFRNLQVVDWDNSLLPLRNIHLLADHSNCYNIWQGTNNVWGTYFYYGGPGRNVRCP 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01800 483 Pfam Neprosin 266 476 IPR004314 -
Gma04g01800 483 Gene3D - 257 369 - -
Gma04g01800 483 MobiDBLite consensus disorder prediction 28 59 - -
Gma04g01800 483 Pfam Neprosin activation peptide 135 240 IPR025521 -
Gma04g01800 483 PANTHER CARBOXYL-TERMINAL PEPTIDASE 45 483 - -
Gma04g01800 483 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 45 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01800 Gma-Chr4 48038572 48048910 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01800 - - gmx:100803280 964.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01607 06 15660885 15666502 Gma04g01800 04 48038572 48048910 ECH
Gma04g01800 04 48038572 48048910 Gma04g01800 04 48038572 48048910 ECH
Gma04g01800 04 48038572 48048910 Gma06g01607 06 15660885 15666502 GST
Gma17g00819 17 6892001 6895317 Gma04g01800 04 48038572 48048910 PCT
Gma05g00380 05 3538804 3542342 Gma04g01800 04 48038572 48048910 PCT
Gma04g01800 04 48038572 48048910 Gma17g00819 17 6892001 6895317 PCT
Gma04g01800 04 48038572 48048910 Gma05g00380 05 3538804 3542342 PCT