Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00380 ATGGACATGAAGAAGGGATATTCAGTTTCCTTGACAAAACAACAACATAAGAAAGAGCCATTTTTTGCAGTTCATCACACAAGAAAACAACACCAATGCATCCAAGCAAATCATGATGCCACAGAAGAAACAAGCTCACAGCAAAATCAATATTCCCTCAAATTGGCTCTTTCTTCCACTTCCCAAAATACTACTCTACTACTGCCTGCTTTTGTTACTTTGCTGCTACTTGTTACCTCAATTGGCACAGCATTCTCTCACCCCACCATTGTCTCCAATTCTTCTTCACCTTTGCCACCAGCACTCTCTCACTCCAATGCTAATAACCAAACTTTGAGACCTGCTGCAGTGCTGCAAAAGTTGAGGAGAATCAGAACTCATCTCGACAAGATCAACAAGCCTGCTGTTAAAACAATCAAGAGTCCAGATGGGGATTTGATTGATTGTGTTTTGTCTCATCAGCAACCTGCGTTTGATCATCCTCAGCTCAAAGGGCAAAGACCATTGGATCCACCAGAAAGGCCAAAGGGACACACCAATGGAGAAACAGTCGTAGAGAGCTTTCAGCTTTGGACTGATTCTGGTGAAGCATGCCCTGAAGGAACTGTTCCAATCAGAAGAACAACTGAACAAGATTTTCTACGAGCAAGCTCTGTTAGAAGATTTGGAAGAAAACCAAGAAATGTACGGAGGGACTCAACAGGCATTGGTCATGAGCATGCAGTTGTTTCTGTAAATGGAGATCAATACTTTGGAGCAAAAGCAAGCATAAACGTGTGGACGCCTAGCGTAACTGATCCATACGAATTCAGTTTGTCACAGATATGGGTTATTGCTGGATCGTTTGGTAATGATCTAAATACCATAGAAGCTGGATGGCAGGTAAGCCCTGAGCTATATGGAGACAACTATCCTAGGTTCTTCACTTATTGGACAACGGATGCATATCAAGCAACAGGATGCTACAACTTACTATGTTCAGGATTTGTCCAAACCAACAACAGAATAGCAATAGGGGCTGCAATCTCACCAAGATCCATCTATAATGGCAGACAATTTGATATTGGATTAATGGTTTGGAAGGACCCAAAGCATGGACATTGGTGGCTGGAGTTTGGGTCGGGGCTACTAGTTGGGTACTGGCCAGCATACTTGTTCAGTCACTTGAGAAACCATGCAAGCATGGTGCAATTTGGAGGGGAAATTGTGAATTCTCGTTCAAGGGGCTACCACACTGGCACTCAAATGGGTAGTGGCCATTTTGCTGGAGAAGGGTTTAGAAAAGCAGCATATTTTAGAAACTTACAAGTTGTTGATTGGGACAATAATTTGCTTCCTCTATCAAATATTCACCAGTTGGCTGACCATTCCAATTGCTATGACATAAGGGTGGGATCAAACAATGTTTGGGGAACTTACTTTTATTATGGAGGTCCGGGAAGGAATGTGAGATGTCCATGA 1461 0.4271 MDMKKGYSVSLTKQQHKKEPFFAVHHTRKQHQCIQANHDATEETSSQQNQYSLKLALSSTSQNTTLLLPAFVTLLLLVTSIGTAFSHPTIVSNSSSPLPPALSHSNANNQTLRPAAVLQKLRRIRTHLDKINKPAVKTIKSPDGDLIDCVLSHQQPAFDHPQLKGQRPLDPPERPKGHTNGETVVESFQLWTDSGEACPEGTVPIRRTTEQDFLRASSVRRFGRKPRNVRRDSTGIGHEHAVVSVNGDQYFGAKASINVWTPSVTDPYEFSLSQIWVIAGSFGNDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPRSIYNGRQFDIGLMVWKDPKHGHWWLEFGSGLLVGYWPAYLFSHLRNHASMVQFGGEIVNSRSRGYHTGTQMGSGHFAGEGFRKAAYFRNLQVVDWDNNLLPLSNIHQLADHSNCYDIRVGSNNVWGTYFYYGGPGRNVRCP 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00380 486 Pfam Neprosin activation peptide 138 243 IPR025521 -
Gma05g00380 486 PANTHER CARBOXYL-TERMINAL PEPTIDASE 46 486 - -
Gma05g00380 486 MobiDBLite consensus disorder prediction 157 179 - -
Gma05g00380 486 Pfam Neprosin 269 479 IPR004314 -
Gma05g00380 486 Gene3D - 263 373 - -
Gma05g00380 486 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 46 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00380 Gma-Chr5 3538804 3542342 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00380 - - gmx:100782442 993.416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00380 05 3538804 3542342 Gma17g00819 17 6892001 6895317 ECH
Gma05g00380 05 3538804 3542342 Gma05g00380 05 3538804 3542342 ECH
Gma17g00819 17 6892001 6895317 Gma05g00380 05 3538804 3542342 GST
Gma05g00380 05 3538804 3542342 Gma04g01800 04 48038572 48048910 PCT
Gma05g00380 05 3538804 3542342 Gma06g01607 06 15660885 15666502 PCT
Gma04g01800 04 48038572 48048910 Gma05g00380 05 3538804 3542342 PCT
Gma06g01607 06 15660885 15666502 Gma05g00380 05 3538804 3542342 PCT