Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00814 ATGGCAAAGCTTGCAGTTCCACCTTTGCTTTCTCTAAGGCACTTGCTGGTGCTATCACTTGCTTTGAATGTGAGTTTGATTCTGAGGACTGTGTATTATGAGAGTGAAAAAGGAAGCAAAGGGTTTTGTTTGAACAAAAACATGATGGCGGATGCAGATTCTGATGATAGAGAGGGGCATCTTATCCACAAATCACGTTTGGCTATGTCCTCTACTTCGTCTCTCGTTAATTCTACTCGTGCAGATCATCCAGGAGGAAGGGAAACAGTGATCAACTTGGATCATGGAGACCCAACCATATATGAAAGATTTTGGAGACAAGTGGGTGACAAGACCACAATCATAATTCCAGGATGGCAATCCTTGAGTTATTTTTCTGATGGCTCAAACATTTGCTGGTTTTTAGAGACCGAGTTTGCAAGGGAAGTAGTGAGGTTACATAAAGTGGTGGGGAATGCTGTGACAGAAGGTCGCCATATTGTTGTTGGGACAGGTTCCTCTCAGCTAATTCTGGCTGCCCTTTATGCCCTGTCCTCGCCTGATGCTGCTGAACCAATCAGTGTGGTATCTGCCGCACCCTATTATTCGTCCTACCCATCAATGGCAGATTATCAGAAATCAGGCCTTTACAAATGGGCTGGTGATGCAGAGAATTTTGACAAAGAGGGTCCTTATATTGAGCTTGTTACTTCTCCCAATAACCCTGATGGACATAGAAGGGAAGCTATGGTCAACCGAAGCCAAGGACTATTGATTCATGACCTTGCCTATTATTGGCCTCAATACACTCCAATATCATCCCCTTCAGATCATGATCTCACTCTTTTCACTGTCTCAAAATCCACTGGTCATGCAGGAATGCGCATAGGGTGGGCTCTTGTCAAAGATAAAGGGGTAGCAAAGAAAATGACTAAATTCATAGAGATAAGTACAATCGGTGTCTCGAAGGATTCTCAACTCAGAGCTGCCAAAGTTTTAAAGGCAGTGTCTGACAGCTGCGAACATGAAAACTCCCAATATGAGGAATCATTTTTCATGTACAGCTACAACATAATGTCACAAAGATGGAAGCAACTGAGAGCAGTAGTTGAGGCCGGTGATTTGTTCACTTTGCCACAATTTTCTCCTGCATTCTGCACCTTCTTTGGTCAGGAGACGGAGCCTCAACCAGCTTTCATATGGCTGAAGTGTGAGGGAGATATAGAGGACTGCGAAAGCTTGCTTCGAGAACACAAAATTATATCAAGAAGTGGGAAACACTTTGGGGCTAGCCCAAAATACGTAAGAATTAGCATGCTGGATACTGATGAAACTTTTATACAGTTAATAGATAGACTATCAGCCATACAACAAGGAGAATAA 1362 0.431 MAKLAVPPLLSLRHLLVLSLALNVSLILRTVYYESEKGSKGFCLNKNMMADADSDDREGHLIHKSRLAMSSTSSLVNSTRADHPGGRETVINLDHGDPTIYERFWRQVGDKTTIIIPGWQSLSYFSDGSNICWFLETEFAREVVRLHKVVGNAVTEGRHIVVGTGSSQLILAALYALSSPDAAEPISVVSAAPYYSSYPSMADYQKSGLYKWAGDAENFDKEGPYIELVTSPNNPDGHRREAMVNRSQGLLIHDLAYYWPQYTPISSPSDHDLTLFTVSKSTGHAGMRIGWALVKDKGVAKKMTKFIEISTIGVSKDSQLRAAKVLKAVSDSCEHENSQYEESFFMYSYNIMSQRWKQLRAVVEAGDLFTLPQFSPAFCTFFGQETEPQPAFIWLKCEGDIEDCESLLREHKIISRSGKHFGASPKYVRISMLDTDETFIQLIDRLSAIQQGE 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00814 453 Gene3D Aspartate Aminotransferase, domain 1 342 450 IPR015422 GO:0003824
Gma17g00814 453 Gene3D - 81 131 IPR037029 GO:0016846
Gma17g00814 453 CDD AAT_like 138 446 - -
Gma17g00814 453 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 1 452 - -
Gma17g00814 453 Gene3D - 135 339 IPR015421 GO:0003824
Gma17g00814 453 SUPERFAMILY PLP-dependent transferases 87 447 IPR015424 -
Gma17g00814 453 Pfam Allinase 91 449 IPR006948 GO:0016846
Gma17g00814 453 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 1 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00814 Gma-Chr17 6816700 6823331 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00814 K16903 - gmx:100818522 872.078
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00814 17 6816700 6823331 Gma17g00814 17 6816700 6823331 ECH
Gma17g00814 17 6816700 6823331 Gma05g00386 05 3621422 3628248 GST
Gma17g00814 17 6816700 6823331 Gma04g01808 04 48137799 48146682 PCT
Gma17g00814 17 6816700 6823331 Gma06g01599 06 15575558 15583862 PCT
Gma04g01808 04 48137799 48146682 Gma17g00814 17 6816700 6823331 PCT
Gma06g01599 06 15575558 15583862 Gma17g00814 17 6816700 6823331 PCT