Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01808 ATGGCTAAGCTTCCTACCATGTTCTCTTTGAGGCACTTTCTGGTACTCTCCCTCGCCTTGAACGTCAGCCTCTTACTCAGATTAATGATGCACCAAGGTGCACAAAAAGCTCACAAAGAAAGAACCAATTCTGTAACTGAGGAGCACCACAATATCCATAAATCACGCATGGTTATATCATCATCATCATCATCGTCATCTACTTCGTCTTTCGCCAATTCTACTTCCACCACAGGAGGCTACAATAGAGTGATCAACCTCGACCATGGAGACCCGACAGCGTATGAGAGGTTTTGGCGACAAACGGGTGACAAGAGCACGATCACAATCCAGGGATGGCAGTCTATGAGTTATTTTTCTGATGTGACCAACATTTGCTGGTTTTTGGAGGCAGAGTTTGGGAGGGAAGTGGTGAGGTTGCACAATGTGGTGGGAAATGCAGTCACAGAAGGGCGTCACATTGTTGTTGGAACAGGTTCTTCTCAGCTCTTTCTTGCTGCTCTTTATGCTCTCTCCCCAACTGATTCACCTGAACCAATCAGTGTCGTTTGTGCCACACCCTACTACTCGTCATATCCATCAATGACGGATCACTTGAAATCAGGGCTTTACAAATGGGGTGGTGATGCAGAAAGTTATGAGAAAGAGGGTCCCTACATTGAGCTGGTTACTTCTCCCAATAATCCTGATGGACACGTAAGAAGATCTAAGGTCAACAGAAGCCAGGGATTTTTGGTCCATGACCTTGCCTATTACTGGCCACAGTACACTCCAATATCAGCACCTGCAGATCACGATCTTACGCTTTTCACTGTCTCAAAAAGCACTGGCCATGCAGGAATGCGCATAGGGTGGGCTCTTGTGAAAGACCAAGAGGTAGCAAAGAAAATGACTAAATTCATAGAGCTCAATACAATTGGAGTGTCTAAGGATTCCCAACTCAGGGCTGCTAAGGTCTTAAGGGCAGTTTCTGATAGCTGGGAACTAGGAAACTCCAAAGAGAGCGAGTCATTCTTCAAATTCAGCCACAAACTCATGGCCAACAGGTGGAAGCAATTGAGACTAGTTGTGGAGAGTAGCGAGTTGTTCAGTTTGCCCAAATTTTCTCCAGCATTCTGCACCTTCTTCAATCAGGTCTTGGAGCCTCAACCAGCTTTTGTATGGTTAAAGTGTGAGGGGAACGTGGAAGACTGCGAAAGCTTCCTTCGAGGACACAACATCTTAACGAGAAGTGGAACACACTTTGGGGTTAGCCCAAAATACGTAAGAATTAGCATGTTGGATACTGACGAAAATTTTAACCAGTTTCTAGATAGACTCTCTGCCATAATGTCGTGA 1338 0.4537 MAKLPTMFSLRHFLVLSLALNVSLLLRLMMHQGAQKAHKERTNSVTEEHHNIHKSRMVISSSSSSSSTSSFANSTSTTGGYNRVINLDHGDPTAYERFWRQTGDKSTITIQGWQSMSYFSDVTNICWFLEAEFGREVVRLHNVVGNAVTEGRHIVVGTGSSQLFLAALYALSPTDSPEPISVVCATPYYSSYPSMTDHLKSGLYKWGGDAESYEKEGPYIELVTSPNNPDGHVRRSKVNRSQGFLVHDLAYYWPQYTPISAPADHDLTLFTVSKSTGHAGMRIGWALVKDQEVAKKMTKFIELNTIGVSKDSQLRAAKVLRAVSDSWELGNSKESESFFKFSHKLMANRWKQLRLVVESSELFSLPKFSPAFCTFFNQVLEPQPAFVWLKCEGNVEDCESFLRGHNILTRSGTHFGVSPKYVRISMLDTDENFNQFLDRLSAIMS 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01808 445 MobiDBLite consensus disorder prediction 37 55 - -
Gma04g01808 445 MobiDBLite consensus disorder prediction 56 77 - -
Gma04g01808 445 MobiDBLite consensus disorder prediction 37 77 - -
Gma04g01808 445 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 3 444 - -
Gma04g01808 445 CDD AAT_like 132 440 - -
Gma04g01808 445 Pfam Allinase 85 443 IPR006948 GO:0016846
Gma04g01808 445 Gene3D Aspartate Aminotransferase, domain 1 328 445 IPR015422 GO:0003824
Gma04g01808 445 Gene3D - 32 125 IPR037029 GO:0016846
Gma04g01808 445 SUPERFAMILY PLP-dependent transferases 83 444 IPR015424 -
Gma04g01808 445 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 3 444 - -
Gma04g01808 445 Gene3D - 129 327 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01808 Gma-Chr4 48137799 48146682 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01808 K16903 - gmx:100807013 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01808 04 48137799 48146682 Gma04g01808 04 48137799 48146682 ECH
Gma04g01808 04 48137799 48146682 Gma06g01599 06 15575558 15583862 GST
Gma17g00814 17 6816700 6823331 Gma04g01808 04 48137799 48146682 PCT
Gma05g00386 05 3621422 3628248 Gma04g01808 04 48137799 48146682 PCT
Gma04g01808 04 48137799 48146682 Gma17g00814 17 6816700 6823331 PCT
Gma04g01808 04 48137799 48146682 Gma05g00386 05 3621422 3628248 PCT