Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01599 ATGTTCTCTTTGAGGCACTTCTTTGTACTCTCTCTCGCCTTGAACGTCAGCCTCATACTCAGATTAATGATGCACCAAGCTCAACAAAAACCTCATCACAATCATTCTGTAACTCATCACGAGGAGCATAACAATAACATCCATAAATCACGCATGCTTATATCATCATCATCATCTACTTCGTCTTTCGCCAATTCTACTTCCACAACAGGAGCTAGCAGCAATAATAGAGTGATCAACCTCGACCATGGAGACCCGACAGCGTATGAGAGGTTTTGGCGACAAACGGGTGACAAGAGCACGATCACAATCCCTGGATGGCAGTCTCTGAGTTATTTTTCTGATGTGACCAACATTTGCTGGTTTTTGGAGGCAGAGTTTGCGAGGGAAGTGGTGAGGCTGCACAATGTGGTTGGAAATGCAGTCACGGAAGGGCGTCACATTGTGGTTGGAACAGGTTCTTCTCAGCTATTTCTTGCTGCTCTTTATGCTCTCTCCCCAATTGATTCACCTGAACCAATCAGTGTTGTATGTGCCTCACCCTACTACTCGTCGTACCCATCAATGACGAATCACTTGAAATCAGGGCTTTACAAATGGGGTGGTGATGCAGAAAGTTATGAGAAAGAGGGTCCCTACATTGAGCTGGTTACTTCTCCCAATAATCCTGATGGACACGTAAGAAGATCTAAGGTCAACAGAAGCCAGGGATTTTTGGTCCATGACCTTGCCTATTACTGGCCACAGTACACTCCAATATCAGCGCCTGCAGATCATGATCTCACGCTTTTCACCGTCTCAAAAAGCACTGGCCATGCAGGAATGCGCATAGGGTGGGCTCTTGTGAAAGACCAAGAGGTAGCAAAGAAAATGACTAAATTCATAGAGCTGAATACAATTGGAGTGTCTAAGGATTCTCAACTCAGGGCTGCTAAGGTCTTAAGGGCAGTTTCTGATAGCTGGGAACAAGGAAACTCCAAAGAGAGCGAGTCATTCTTCAAATTCAGCCACAAACTCATGGCCAACAGGTGGAAGCAATTGAGACTAGTTGTGGAGCGCAGCGAGTTGTTCAGTTTGCCCAAATTTTCTCCAGCATTCTGCACCTTTTTCAATCAGGTCTTGGAGCCTCAACCAGCTTTTGTGTGGTTAAAGTGTGAGGGAAACGTGGAAGACTGCGAAAGCTTCCTTCGAGGATACAACATCTTAACGAGAAGTGGAATACACTTTGGGGTTAGCCCAAAATACGTAAGAATTAGCATGTTGGATACTGACGAAAATTTTAACCAGTTTCTGGATAGACTCTCTGCCATACAGTCGTGA 1320 0.4508 MFSLRHFFVLSLALNVSLILRLMMHQAQQKPHHNHSVTHHEEHNNNIHKSRMLISSSSSTSSFANSTSTTGASSNNRVINLDHGDPTAYERFWRQTGDKSTITIPGWQSLSYFSDVTNICWFLEAEFAREVVRLHNVVGNAVTEGRHIVVGTGSSQLFLAALYALSPIDSPEPISVVCASPYYSSYPSMTNHLKSGLYKWGGDAESYEKEGPYIELVTSPNNPDGHVRRSKVNRSQGFLVHDLAYYWPQYTPISAPADHDLTLFTVSKSTGHAGMRIGWALVKDQEVAKKMTKFIELNTIGVSKDSQLRAAKVLRAVSDSWEQGNSKESESFFKFSHKLMANRWKQLRLVVERSELFSLPKFSPAFCTFFNQVLEPQPAFVWLKCEGNVEDCESFLRGYNILTRSGIHFGVSPKYVRISMLDTDENFNQFLDRLSAIQS 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01599 439 MobiDBLite consensus disorder prediction 58 79 - -
Gma06g01599 439 Gene3D Aspartate Aminotransferase, domain 1 323 439 IPR015422 GO:0003824
Gma06g01599 439 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 1 438 - -
Gma06g01599 439 CDD AAT_like 126 434 - -
Gma06g01599 439 Pfam Allinase 79 437 IPR006948 GO:0016846
Gma06g01599 439 SUPERFAMILY PLP-dependent transferases 76 436 IPR015424 -
Gma06g01599 439 Gene3D - 43 119 IPR037029 GO:0016846
Gma06g01599 439 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 1 438 - -
Gma06g01599 439 Gene3D - 123 322 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01599 Gma-Chr6 15575558 15583862 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01599 K16903 - gmx:100820582 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01599 06 15575558 15583862 Gma06g01599 06 15575558 15583862 ECH
Gma04g01808 04 48137799 48146682 Gma06g01599 06 15575558 15583862 GST
Gma17g00814 17 6816700 6823331 Gma06g01599 06 15575558 15583862 PCT
Gma05g00386 05 3621422 3628248 Gma06g01599 06 15575558 15583862 PCT
Gma06g01599 06 15575558 15583862 Gma17g00814 17 6816700 6823331 PCT
Gma06g01599 06 15575558 15583862 Gma05g00386 05 3621422 3628248 PCT